DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act87E and ARP6

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_566861.1 Gene:ARP6 / 823150 AraportID:AT3G33520 Length:421 Species:Arabidopsis thaliana


Alignment Length:424 Identity:133/424 - (31%)
Similarity:210/424 - (49%) Gaps:64/424 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT---LKY 70
            :|:|||.|:.|||..|:..|..|.|:.:.:|......:......: :.||..     ||   ::.
plant     5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEID-----LTSAAVRR 63

  Fly    71 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 135
            ||:.|.:.|.|...:||.|.|.:.|.:||....:|||||||:..:.:....:::||.|...::|:
plant    64 PIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYI 128

  Fly   136 A-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
            | .|:::.||.:.|         ...:|:|.|...:|.||:...:.|.|||.|:||.|:..|:||
plant   129 AHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYL 193

  Fly   191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDGQVITIG-- 252
            .::::.|  |.....|..:|.|.|||||:|:||..:::..|....:|.|| |.||||...|.|  
plant   194 KELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKGYV 256

  Fly   253 ----------------------------------------NERFRCPESLFQPSFLGMESCGIHE 277
                                                    ||||..||:||||:.|||...|:.|
plant   257 KDPQAAKRFLSLSEKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAE 321

  Fly   278 TVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWI 342
            .:..:|..|...::..||.:|:::||:|::|.:.:|::.|:..|.|....:||....:....||.
plant   322 CIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWR 386

  Fly   343 GGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            |||:|||...|:.|.::|.||:|.|.....|:.|
plant   387 GGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823 131/417 (31%)
ARP6NP_566861.1 ASKHA_NBD_Arp6 4..411 CDD:466816 130/413 (31%)

Return to query results.
Submit another query.