DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act87E and actr2a

DIOPT Version :9

Sequence 1:NP_001287314.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_021326108.1 Gene:actr2a / 406820 ZFINID:ZDB-GENE-040426-2894 Length:399 Species:Danio rerio


Alignment Length:385 Identity:175/385 - (45%)
Similarity:251/385 - (65%) Gaps:20/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP-RHQGVMVG------MGQKDSYVGDEAQSKRGIL 66
            :|.|||:|..|.|:||.:.|..:||::|||| ......||      ..:.|..|||||...|.:|
Zfish     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGNIEIKDYRRMDLMVGDEASELRSML 73

  Fly    67 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNA 130
            .:.||:|:||:.|||||:.:|.:||..| |.:......:||||.|:||..||||:.::||||:..
Zfish    74 EVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNREKIIEVMFETYQF 138

  Fly   131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
            ..:|:||||||:|||.|..||:|:||||||:|..|:|||::|||...|||:||||:|.||:|:|.
Zfish   139 SGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLL 203

  Fly   196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 260
            .|||:|..:|:.|.||.:|||||||..:.|||...|..:|.|.:||.||||:||.:|.|||..||
Zfish   204 LRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGERFEAPE 268

  Fly   261 SLFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITAL---- 321
            :||||..:.:|..|:.|.::|:|...|:|.|.:.|.:||:|||:|||||:..|:::|:..|    
Zfish   269 ALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLER 333

  Fly   322 -------APSTIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPGIVHR 373
                   ..|..||:|..||.||:.|::||::||. :......|::::||.|.|..::.:
Zfish   334 VLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTREEYQEKGTRVLEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_001287314.1 PTZ00281 1..376 CDD:173506 175/385 (45%)
actr2aXP_021326108.1 ACTIN 6..393 CDD:214592 175/383 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.