DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act87E and Arp6

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster


Alignment Length:408 Identity:111/408 - (27%)
Similarity:197/408 - (48%) Gaps:54/408 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY- 70
            |.:|:|||:...|.|.|..|.|..| |:.:.:.:.:       ::.::||::....|....|.| 
  Fly     4 AVVVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYI 60

  Fly    71 -PIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 133
             ..:.|.:.||...:.:|.:.|..: :..:.|...:::||..:|.::.:|...:|:||.:....:
  Fly    61 LAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGV 125

  Fly   134 YVAIQAVLSLY-----ASGRTT-----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 188
            |....|.|:.:     :..|||     .|::|.|...:|.||...|..:...|.|:|:.|:.||:
  Fly   126 YKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTN 190

  Fly   189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK------SYELPD-- 245
            .|.::::.|  ......|..:|..|||.:|:||.||:|.|   ....|.||      .|.|||  
  Fly   191 QLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAM---QVHYSEEKRREVTVDYVLPDFT 250

  Fly   246 -------------------GQVITIGNERFRCPESLFQPSFLGMESCGIHETVYNSIMKCDVDIR 291
                               .|::::.||||..||.||.||.:|::..||.|.|.:.:..|..:..
  Fly   251 TVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAH 315

  Fly   292 KDLYANIVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
            ::|..||::.||:..:||...|:::::.||.|..:::.:|.|.:.....|.||..:|:...|::.
  Fly   316 RELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEF 380

  Fly   357 WISKQEYDESG-PGIVHR 373
            ..::.:|:|.| .||..|
  Fly   381 VYTQDDYEEYGFQGINQR 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823 109/404 (27%)
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 106/398 (27%)

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