DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act87E and Actl11

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001019959.2 Gene:Actl11 / 316000 RGDID:1310036 Length:1218 Species:Rattus norvegicus


Alignment Length:369 Identity:148/369 - (40%)
Similarity:224/369 - (60%) Gaps:21/369 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
            ::||:|:|.|:|..|.|.|.::...:|.||.|...:|.    ..||....|.:..:....:|   
  Rat   868 KMAAIVIDTGTGFTKCGLAQENHVLSVVPSQVQMLQHP----PQGQPQYVVPEHQEGSYSVL--- 925

  Fly    70 YPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 134
               ..|::::||.:|.:|.|.||.:|||.|||..||:.::|::|:.||||:.:|:||.|:.|||.
  Rat   926 ---NRGVVSDWDALEVLWQHLFYCKLRVQPEEMAVLVADSPISPRTNREKVAEILFERFHVPAMQ 987

  Fly   135 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199
            ...||:|:|||.|||||:|:.||.|.|:..||..|...|....|||:||.||||||.::|...|:
  Rat   988 TVHQALLTLYAYGRTTGLVVGSGHGTSYVAPIITGDLAPLDTYRLDVAGADLTDYLAQLLMSGGH 1052

  Fly   200 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPESLFQ 264
            |   ..:..|||.|||..||||:|...|||...:...::  :.|||..|||:|:|||.|||:|||
  Rat  1053 S---PPKGGIVRQIKEACCYVAMDTTTEMARNQSQVQVD--FVLPDKHVITLGSERFCCPEALFQ 1112

  Fly   265 PSFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITALAPSTIKIK 329
            |:.||:...|:.:....||.:.:|..::.|.||:|:.||:|:..|..:||::|   |.|..   .
  Rat  1113 PNLLGLNQLGLPQLALLSISRLEVKQQEQLLANVVLEGGSTLINGFPERMRQE---LGPGA---T 1171

  Fly   330 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHR 373
            ::..|.|..:.|:||||:|...:||.:|:|::||:|.||..:::
  Rat  1172 VLGSPHRAVAAWLGGSIMACRDSFQSLWLSRREYEEEGPWAIYK 1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823 148/363 (41%)
Actl11NP_001019959.2 PHA03247 <200..485 CDD:223021
ASKHA_ATPase-like 867..1215 CDD:483947 148/367 (40%)
Blue background indicates that the domain is not in the aligned region.

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