DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act87E and Actl9

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001101547.1 Gene:Actl9 / 314659 RGDID:1306886 Length:415 Species:Rattus norvegicus


Alignment Length:261 Identity:53/261 - (20%)
Similarity:94/261 - (36%) Gaps:71/261 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1096 ISNQALGDNSYLAEALFLSYIQLSVNKSVSDLHQLSLVDPISGTILTPSNGQFLYSVDI------ 1154
            :|..|.|:  .|.||||||                  |||    .:.|.:...:.:.|:      
  Rat    29 LSEPANGE--VLLEALFLS------------------VDP----YMRPFSSFRMKAEDVMIGTQV 69

  Fly  1155 --AVMNYKPINYYNCYIYHQNSGWDFRQCV-SSIYAKMINNQSFFTCNCSSTGIIGVFLTSGPAP 1216
              .:.:..|.....|::..: |||...... .|...|::::.........:.|.||:     |..
  Rat    70 AKVIKSNNPSFPVGCHVVGR-SGWRTHTLSDGSDLTKILDDWPHDVSLSRALGAIGM-----PGL 128

  Fly  1217 TPLPDHNEILL-----TLIIDMEVSSDDLAKIFTKIAQLSEVETKRFVKIANKGNKTIQATLRPP 1276
            |.|....|:..     ||:::  .::..:..:..:||:|             ||.|.:.:.    
  Rat   129 TALYGLEEVCAIKPGETLLVN--AAAGAVGSVVGQIAKL-------------KGCKVVGSA---- 174

  Fly  1277 FRSDQKSNSVAVQCIQKAVGYQKILNLITVLNFTYSVVNRELNG-DSYARKLTFNFLNSYINKLS 1340
             ..|.|   ||   ..|.:|:.:..|..||.:...::.|....| |.|...:..:|.:..|.::.
  Rat   175 -GGDDK---VA---YLKELGFDQAFNYKTVPSLEEALKNASPEGYDCYFESVGGHFSSVAIPQMK 232

  Fly  1341 D 1341
            |
  Rat   233 D 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823
Actl9NP_001101547.1 ASKHA_ATPase-like 47..414 CDD:483947 42/223 (19%)
Blue background indicates that the domain is not in the aligned region.

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