DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act87E and Actr1a

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_006231532.1 Gene:Actr1a / 294010 RGDID:1307025 Length:396 Species:Rattus norvegicus


Alignment Length:390 Identity:197/390 - (50%)
Similarity:281/390 - (72%) Gaps:27/390 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ------------- 60
            :|:|||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:             
  Rat    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEVIPSPTEEASGLQ 76

  Fly    61 -------SKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANR 117
                   ..||:|:::||:||||:.:|:|||:||.:.: .::|:...||||||||||||||:.||
  Rat    77 RAYLSTTEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNR 141

  Fly   118 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 182
            |:..::.|||||.||:::::||||||||:|||||:||||||||:|.||||||:|:||:|:|:|:|
  Rat   142 ERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIA 206

  Fly   183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDG 246
            |||::.:|...|.:.||.|.:::|.|||:.|||:.||::::.:::     .:...||: |.||||
  Rat   207 GRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKD-----ETLETEKAQYYLPDG 266

  Fly   247 QVITIGNERFRCPESLFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIA 311
            ..|.||..|||.||.||:|..:|.||.||||.:..:|.|.|:|:|:.|::|||:|||:|::.|..
  Rat   267 STIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFG 331

  Fly   312 DRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ||:..|:..|||..:||:|.||.||.||.||||||||||.||::||:||:||:|.|...:|||.|
  Rat   332 DRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 396

  Fly   377  376
              Rat   397  396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823 193/383 (50%)
Actr1aXP_006231532.1 ASKHA_NBD_Arp1 9..395 CDD:466820 195/387 (50%)

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