DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act87E and Actl6b

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_006249182.1 Gene:Actl6b / 288563 RGDID:1307763 Length:444 Species:Rattus norvegicus


Alignment Length:437 Identity:157/437 - (35%)
Similarity:230/437 - (52%) Gaps:67/437 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDSYVGDEAQ 60
            |||.|||.|.||...:||:||:|.|:...|.....||....:        ||:...:...|.|.:
  Rat     9 DEVGALVFDIGSFSVRAGYAGEDCPKVSLPVPSPYPRGSDTLCQADFPTTVGLLAAEEGGGLELE 73

  Fly    61 ---SKRGIL---------------TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
               .|:|.:               .:..|:::|:|.:|:....|..||:...::..|..||||::
  Rat    74 GEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS 138

  Fly   108 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT--VPIYEGY 170
            |||.|.:|.|||:|::|||.:|.||.::...|||:.:|:||:||:||||  |.:||  :|:::||
  Rat   139 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDS--GATHTTAIPVHDGY 201

  Fly   171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA---- 221
            .|...|::..|||..::....::..|......   ..|.:|.||:       .||||..|:    
  Rat   202 VLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWH 266

  Fly   222 --------LDFEQEMATAAASTSLEK--------SYELPDGQVITIGNERFRCPESLFQPS---- 266
                    .||:..:...:.|...|:        .||:|:|.....|.||.|.||.||.||    
  Rat   267 NYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKG 331

  Fly   267 FLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 331
            ..|....|:...|..||..||:|||..||.:::::||.|:..|..||:.:|::...|.::::|:|
  Rat   332 LSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLI 396

  Fly   332 A---PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            |   ..|||:|.||||||||||.||||||||||||:|.|...|.|||
  Rat   397 ASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823 150/428 (35%)
Actl6bXP_006249182.1 ASKHA_NBD_Arp4_ACTL6-like 8..435 CDD:466846 152/427 (36%)

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