DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act87E and Actg1

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001120921.1 Gene:Actg1 / 287876 RGDID:1304556 Length:375 Species:Rattus norvegicus


Alignment Length:374 Identity:357/374 - (95%)
Similarity:370/374 - (98%) Gaps:0/374 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
            ::|:||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66

  Fly    68 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPA 132
            |||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||.||
  Rat    67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 131

  Fly   133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
            |||||||||||||||||||||:||||||:||||||||||||||||||||||||||||||||||||
  Rat   132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 196

  Fly   198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPESL 262
            |||||||||||||||||||||||||||||||||||:|:|||||||||||||||||||||||||:|
  Rat   197 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 261

  Fly   263 FQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITALAPSTIK 327
            ||||||||||||||||.:|||||||||||||||||.|:|||||||||||||||||||||||||:|
  Rat   262 FQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 326

  Fly   328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            |||||||||||||||||||||||||||||||||||||||||.|||||||
  Rat   327 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823 349/363 (96%)
Actg1NP_001120921.1 ASKHA_NBD_actin 6..370 CDD:466823 349/363 (96%)

Return to query results.
Submit another query.