DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act87E and act-1

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_505819.1 Gene:act-1 / 179535 WormBaseID:WBGene00000063 Length:376 Species:Caenorhabditis elegans


Alignment Length:316 Identity:58/316 - (18%)
Similarity:102/316 - (32%) Gaps:89/316 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   730 LSTNAPPTKGNIDISVPF------------YPP---------FALE----TPVTFSVGDGWNDD- 768
            :::||.|...:..:|.||            ||.         |:::    ||.:.:.|:..:.| 
 Worm     4 VTSNASPKSFSFTVSNPFKTLIPNKSPSLCYPTRNKNHHRLGFSIKATVSTPPSIATGNAPSPDY 68

  Fly   769 -----KDDLPLTYQFGYRIHYDNNETYEYQGSKSTVKYIQFFLPSTSGNGSDECGERIGITALLT 828
                 .:.||...:|              :|....|||      ..:...|.|....:....:|.
 Worm    69 RVEILSESLPFIQKF--------------RGKTIVVKY------GGAAMTSPELKSSVVSDLVLL 113

  Fly   829 VCDRLGSCNSEESGMFIVEPSKNSSIAA-------------LDLISLLNTDVTNGNFISAIAKIN 880
            .|..|........|..|....|..:|.|             ::::|::.....|.|.:|.|....
 Worm   114 ACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSLINAAG 178

  Fly   881 ALNIELCTENFDESQTDHITMLLFQSLSESSESEEF--QIALKAAYSLLPVVSSDILTVLIDVLS 943
            |..:.|         :.|...||......:|....|  ::|......|.|:|....:.|:..|.:
 Worm   179 ATAVGL---------SGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAA 234

  Fly   944 NYRELTFKTLEGNTNSRRKRAVNEVQTTAKVYQATESEATDML-KVYDILIGKDKP 998
            :             :|.:...:|......::..|..:|...:| .|..||..|:.|
 Worm   235 D-------------DSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDP 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823
act-1NP_505819.1 ASKHA_NBD_actin 7..371 CDD:466823 58/313 (19%)
Blue background indicates that the domain is not in the aligned region.

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