DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act87E and swsn-6

DIOPT Version :10

Sequence 1:NP_477091.1 Gene:Act87E / 48632 FlyBaseID:FBgn0000046 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_500801.2 Gene:swsn-6 / 177325 WormBaseID:WBGene00022774 Length:436 Species:Caenorhabditis elegans


Alignment Length:435 Identity:143/435 - (32%)
Similarity:217/435 - (49%) Gaps:71/435 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV--------GD--E 58
            |||:.||.|.||...:.||||::.|:...||.:.        |.....|..:        ||  :
 Worm     9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIA--------VQEALPDDTIEKQEAMEEGDNSK 65

  Fly    59 AQSKR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
            .|:||      |...:..|         ::.|:|.:|:..|||..|::.|.|...|.|||||.:|
 Worm    66 VQTKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSE 130

  Fly   109 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 173
            :..|.:|.|||:|:||||.|..||.|::...|||.:|.|||.|:::|||...:..||:::|||:.
 Worm   131 SSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVT 195

  Fly   174 HAILRLDLAGRDLTDYLMKILTER------------------GYSFTTTAEREIVRDIKEKLCYV 220
            ||:::..:.|..:|:.|.::|.::                  |.:...|..:.:.:..|....::
 Worm   196 HAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGEAPKWTPRKNLPQVTKSYDAFM 260

  Fly   221 ALDFEQEMATA---AASTSLEKS---------YELPDGQVITIGNERFRCPESLFQPSFLGMES- 272
            .....::||..   ...||::..         |..|:|.....|.||.:.||.||...:|..|. 
 Worm   261 KKMLLEDMAATMLQLCDTSIDMDYVDKLPSTPYAFPNGYTKEFGAERIKLPECLFDLGYLKAEGK 325

  Fly   273 ----CGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 333
                ..:.:....|....|:|||..|::|:.::||.::..|..:|:...:....|.|||:::.|.
 Worm   326 KDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAA 390

  Fly   334 P---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            |   ||||..|||||||.||.||||||:||.||||||..||.:||
 Worm   391 PTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act87ENP_477091.1 ASKHA_NBD_actin 7..371 CDD:466823 136/426 (32%)
swsn-6NP_500801.2 ASKHA_NBD_Arp4_ACTL6-like 8..427 CDD:466846 137/425 (32%)

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