DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5704 and LDH1

DIOPT Version :10

Sequence 1:NP_652068.1 Gene:CG5704 / 48613 FlyBaseID:FBgn0026570 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_009763.2 Gene:LDH1 / 852503 SGDID:S000000408 Length:375 Species:Saccharomyces cerevisiae


Alignment Length:146 Identity:40/146 - (27%)
Similarity:65/146 - (44%) Gaps:27/146 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GNRNERPILAIHGWLDNLGTFDRLIPLL-PDYLGVLCIDLPGHGRSSHLPPGMYYSVYEYVFTIP 90
            |.|.:...:.:.|...||..|:.|:.|: .|....|.:||||.|.||.........|.|.:|.:.
Yeast    82 GIRGDTVFVFVPGLAGNLEQFEPLLELVDSDQKAFLTLDLPGFGHSSEWSDYPMLKVVELIFVLV 146

  Fly    91 L-VMKEYGWS---------------KVSLIGHSLGGVLS-FIYASLAPHTVD--MIVSLDILLPL 136
            . |:::  ||               |:.|:|||:|..|: .:|..   |..|  .:.:|.:|.|.
Yeast   147 CDVLRK--WSTAVPNNDNVNPFNGHKIVLVGHSMGCFLACHLYEQ---HMADTKAVQTLVLLTPP 206

  Fly   137 RNDIDYMDLSIEKQLV 152
            :..|:  .||.:|.::
Yeast   207 KAHIE--QLSKDKHII 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5704NP_652068.1 MenH 32..301 CDD:440361 38/141 (27%)
LDH1NP_009763.2 Abhydrolase_1 87..358 CDD:395444 38/141 (27%)

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