DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp70Bc and hspa12b

DIOPT Version :9

Sequence 1:NP_650209.1 Gene:Hsp70Bc / 48583 FlyBaseID:FBgn0013279 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001036151.1 Gene:hspa12b / 735291 ZFINID:ZDB-GENE-070226-1 Length:691 Species:Danio rerio


Alignment Length:669 Identity:138/669 - (20%)
Similarity:235/669 - (35%) Gaps:204/669 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTT---YSCVGVYQHGKVEIIANDQG------NRTTPSYVAFTDSERLIGDPAKNQVAMN 59
            :.||.|||   |:...:.....:.::...:|      |:.:|:.:..|...|.      :.....
Zfish    63 VAIDFGTTSSGYAFSFIEDPETIHMMRRWEGGDPGVANQKSPTCLLLTPDLRF------HSFGFA 121

  Fly    60 PRNTVFDAKRLIGRKYDDPKIAEDMKHW----PFKV----VSD----------GGKPKIGVEYKG 106
            .|::..|.         ||   |:.:||    .||:    .||          .|:....:|...
Zfish   122 ARDSYHDL---------DP---EEARHWLYFDKFKMKIHSTSDLTMETELESVSGRRVQAIEVFA 174

  Fly   107 ESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGL------N 165
            .:.||..|.    .|.::|:.:.:.|..:....||||||.:....:|..::|.::|||      .
Zfish   175 HALRFFREH----ALKEVKDQSSSVLEGNEVRWVITVPAVWRQPAKQFMREAAYLAGLVPPDSPE 235

  Fly   166 VLRIINEPTAAAL------------------AYGLDKNLKGER---------------------- 190
            .|.|..||.||::                  ..|.|  :.|.|                      
Zfish   236 QLLIALEPEAASIYCRKLRLHQVTDLSQRPVTNGFD--IDGSRPFDSSFRQAREQLRRARHSRTF 298

  Fly   191 -----------------NVLIFDLGGGTFDVSILTID--EGSLFEVRSTAGDTHLGGEDFDNRLV 236
                             ..::.|.||||.|:::..|:  :|:|.|:...:|..: |....|....
Zfish   299 LVESGTGELWSEMQTGDRYIVADCGGGTVDLTVHQIEQPQGTLKELYKASGGPY-GAVGVDLAFE 362

  Fly   237 THLAEEFKRKYKKDLRS-NPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFY-------- 292
            |.|.:.|...:....:: .|.|...|..|.|..|||.:.....|:.|...|...|||        
Zfish   363 TMLCQIFGTDFIDSFKAKRPAAWVDLTIAFEARKRTAAPGRANTLNISLPFSFIDFYKQHRGQSV 427

  Fly   293 ---TKVSRARF------------EELCADLFRNTLQPVEKALNDAKMDKGQIHDI---VLVGGST 339
               .:.|...|            .|...:||:.|:..:.|.:.:. |.|.::..:   .||||..
Zfish   428 ETALRKSNMNFIKWSSQGMLRLSTEATNELFQPTINNIIKHIENV-MQKEEVKGVRFLFLVGGFA 491

  Fly   340 RIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSG-DQSGKIQDVLLVDVAPLSLGIET 403
            ..|.:|..:|... |:|..:.|..|..:   ..::.|:|.| |.:     |:.|...||:.|:  
Zfish   492 ESPMLQRAIQNTL-GRNCRIIIPHDVGL---TILKGAVLFGLDPT-----VVRVRRCPLTYGV-- 545

  Fly   404 AGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEG--------ERAMTKDNN-ALGTFDL 459
              ||:.:.:|                 ...|...:.:.:|        :|.::.|.: |||....
Zfish   546 --GVLNRFVE-----------------GRHPHDKLLIKDGREWCTDILDRFVSVDQSVALGEVVR 591

  Fly   460 SGIPPAPRGVPQI----------EVTFDLDAN----GILNVSAKEMSTGKAKNITIKNDKGRLSQ 510
            ....||..|..:|          ::|:..|..    |.:.:...|  :|:|...|..||||...:
Zfish   592 RSYTPARMGQRKIIINIYCSDTDDITYITDPGVRKCGAITLDLLE--SGEASASTGDNDKGSAFE 654

  Fly   511 AEIDRMVNEAEKYADEDEK 529
            .   |.:....::.|.:.|
Zfish   655 R---REIRTTMQFGDTEIK 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BcNP_650209.1 PTZ00009 2..641 CDD:240227 138/669 (21%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 102/493 (21%)
hspa12bNP_001036151.1 HSPA12B_like_NBD 61..529 CDD:212686 103/495 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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