DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp70Bc and Hspa12a

DIOPT Version :9

Sequence 1:NP_650209.1 Gene:Hsp70Bc / 48583 FlyBaseID:FBgn0013279 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_017444569.1 Gene:Hspa12a / 307997 RGDID:1305531 Length:691 Species:Rattus norvegicus


Alignment Length:659 Identity:137/659 - (20%)
Similarity:227/659 - (34%) Gaps:208/659 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYS-----------CVGVYQHGKVEIIANDQG--NRTTPSYVAFTDSERLIGDPAKNQ 55
            :.||.|||.|           |:.|.:..:    ..|.|  |:.||:.:..|...:.      :.
  Rat    75 VAIDFGTTSSGYAYSFTKEPECIHVMRRWE----GGDPGVSNQKTPTTILLTPERKF------HS 129

  Fly    56 VAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGE-----------SK 109
            .....|:...|.         ||   .:.|.|.:.     .|.|:.:...|:           .|
  Rat   130 FGYAARDFYHDL---------DP---NEAKQWLYL-----EKFKMKLHTTGDLTMDTDLTAANGK 177

  Fly   110 RFAPEEISSMVLTKMKETAEAYLGESI------TDA--VITVPAYFNDSQRQATKDAGHIAGL-- 164
            :....||.:..|...||.|...|.:..      :|.  ||||||.:....:|..::|.:.|||  
  Rat   178 KVKALEIFTYALQYFKEQALKELSDQAGSDFENSDVRWVITVPAIWKQPAKQFMREAAYQAGLAS 242

  Fly   165 ----NVLRIINEPTAAAL--------------------AYG------------------------ 181
                ..|.|..||.||::                    .|.                        
  Rat   243 PENSEQLIIALEPEAASIYCRKLRLHQMIELSSKAVVNGYSASDTVGAGFAQAKEHVRRNRQSRT 307

  Fly   182 -LDKNLKGE--------RNVLIFDLGGGTFDVSI--LTIDEGSLFEVRSTAGDTH--LGGE-DFD 232
             |.:|:.||        ...::.|.||||.|:::  :.:.||.|.|:....|..:  ||.: :|:
  Rat   308 FLVENVIGEIWSELEEGDKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFE 372

  Fly   233 NRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV-- 295
            ..|.....|:|..::|   ...|.|...|..|.|..||..:......:.|...|...|:|.|.  
  Rat   373 KLLCKIFGEDFIEQFK---IKRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRG 434

  Fly   296 ---------SRARFEELCAD------------LFRNTLQPVEKALND--AKMDKGQIHDIVLVGG 337
                     |...|.:..:.            ||:.|:..:.:.|.|  .|.:...:..:.||||
  Rat   435 HSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLRDLFQKPEVSTVKFLFLVGG 499

  Fly   338 STRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSG-DQSGKIQDVLLVDVAPLSLGI 401
            ....|.:|..:|..| |....:.|..|..:   ..::.|:|.| |.:     |:.|..:||:.|:
  Rat   500 FAEAPLLQQAVQAAF-GDKCRIIIPQDVGL---TILKGAVLFGLDPA-----VIKVRRSPLTYGV 555

  Fly   402 ETAGGVMTKLIE--------------RNCR------IPCKQT--------KTFSTYSDNQPGVSI 438
                ||:.:.:|              |.|.      |...|:        ::::....:|..:.|
  Rat   556 ----GVLNRYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRSYTPAKPSQLVIII 616

  Fly   439 QVYEGER---AMTKDNNA--LGT--FDLSGIP----PAPRGVPQIEVTFDLDANGILNVSAKEMS 492
            .:|..|.   :...|...  .||  .||:|..    ||.|.:..:....|.:    :..:|.:::
  Rat   617 NIYSSENDDVSFITDPGVKKCGTLRLDLTGTSGAAVPARREIQTLMQFGDTE----IKATAVDIA 677

  Fly   493 TGKAKNITI 501
            |.|:..:.|
  Rat   678 TSKSVKVGI 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BcNP_650209.1 PTZ00009 2..641 CDD:240227 137/659 (21%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 104/495 (21%)
Hspa12aXP_017444569.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.