DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp70Bc and ssc1

DIOPT Version :9

Sequence 1:NP_650209.1 Gene:Hsp70Bc / 48583 FlyBaseID:FBgn0013279 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_593459.1 Gene:ssc1 / 2543026 PomBaseID:SPAC664.11 Length:674 Species:Schizosaccharomyces pombe


Alignment Length:646 Identity:296/646 - (45%)
Similarity:421/646 - (65%) Gaps:45/646 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFT-DSERLIGDPAKNQVAMNPRNTVF 65
            |.||||||||.||:.:.:....::|||.:|.|||||.|||| |.|||:|..||.|..:||.||.|
pombe    51 PVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFF 115

  Fly    66 DAKRLIGRKYDDPKIAEDMKHWPFKVV--SDGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETA 128
            ..||||||::.:|::..|:|..|:|:|  |:|   ...:|.:|  |.::|.:|...:|:||:|||
pombe   116 ATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARG--KTYSPSQIGGFILSKMRETA 175

  Fly   129 EAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLKGERNVL 193
            ..|||:.:.:||:|||||||||||||||.||.||||||||::||||||||||||||  |.:..|.
pombe   176 STYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDK--KNDAIVA 238

  Fly   194 IFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRAL 258
            :|||||||||:|||.::.| :||||||.|||||||||||..||.|:.|.||:....||..:..|:
pombe   239 VFDLGGGTFDISILELNNG-VFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAV 302

  Fly   259 RRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYT-----------KVSRARFEELCADLFRNTL 312
            :|:|.|||:||..|||.::..|.:       .|.|           ::|||:||:|...|.|.|:
pombe   303 QRIREAAEKAKCELSSLSKTDISL-------PFITADATGPKHINMEISRAQFEKLVDPLVRRTI 360

  Fly   313 QPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAI 377
            .|.::||.||.:...:|::::||||.||:|:|...::..|..:... |:|||||||.|||:|..:
pombe   361 DPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFKREPAK-SVNPDEAVAIGAAIQGGV 424

  Fly   378 LSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYE 442
            |    ||.::|::|:||.||||||||.|||.|:||.||..||.::::.|||.:|.|..|.|:|::
pombe   425 L----SGHVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQ 485

  Fly   443 GERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGR 507
            |||.:.:||..:|.|.|:||.|||:|.|||||:||:||:||:||||::.:|.|..:||:....| 
pombe   486 GERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG- 549

  Fly   508 LSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAGKLDE---ADKNSVLD 569
            |:.:||:.||.:||||...|...::.|.:.|..||...:::.::: ....|||:   .|..|.:.
pombe   550 LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLD-IHKDKLDQQAVEDLRSKIT 613

  Fly   570 KCNETIRWL---DSNTTAE--KEEFDHKMEELTRHCSPIMTKMHQQGAGAAGGPGANCGQQ 625
            ...||:..:   |...|:|  |::.| ::::|:......:.|...||..::|...|..|.:
pombe   614 DLRETVAKVNAGDEGITSEDMKKKID-EIQQLSLKVFESVYKNQNQGNESSGDNSAPEGDK 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BcNP_650209.1 PTZ00009 2..641 CDD:240227 296/646 (46%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 195/389 (50%)
ssc1NP_593459.1 dnaK 49..671 CDD:234715 295/642 (46%)
HSPA9-like_NBD 49..425 CDD:212683 196/389 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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