DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp70Bb and LHS1

DIOPT Version :9

Sequence 1:NP_524927.2 Gene:Hsp70Bb / 48582 FlyBaseID:FBgn0013278 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_012850.1 Gene:LHS1 / 853789 SGDID:S000001556 Length:881 Species:Saccharomyces cerevisiae


Alignment Length:667 Identity:154/667 - (23%)
Similarity:298/667 - (44%) Gaps:95/667 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLG-TTYSCVGVYQHGKVEIIANDQGNRTTPSYVAF-----------TDSERLIGDPAKNQV 56
            :|:|.| .....:.|.....:|::...:..|...|.::.           ...||:.|....:..
Yeast    23 LGVDYGQQNIKAIVVSPQAPLELVLTPEAKRKEISGLSIKRLPGYGKDDPNGIERIYGSAVGSLA 87

  Fly    57 AMNPRNTVFDAKRLIGRKYDDPKIAE--DMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSM 119
            ...|:||:...|.|:|:..:|.....  ..:|...::||..   :..:.:..::..:..||:.:|
Yeast    88 TRFPQNTLLHLKPLLGKSLEDETTVTLYSKQHPGLEMVSTN---RSTIAFLVDNVEYPLEELVAM 149

  Fly   120 VLTKMKETAEAYLGES-------ITDAVITVPAYFNDSQRQATKDAGHI-AGLNVLRIINEPTAA 176
            .:.::...|.:.|.:.       :.....|:|.:|:..||:|..||..| .|:....:::|..:.
Yeast   150 NVQEIANRANSLLKDRDARTEDFVNKMSFTIPDFFDQHQRKALLDASSITTGIEETYLVSEGMSV 214

  Fly   177 ALAYGLDKNL--KGE-RNVLIFDLGGGTFDVSILTI------DEGSLFEVRSTAGDTHLGGEDFD 232
            |:.:.|.:..  .|| ::.:::|:|.|:...|:.:|      .:....|......:.||||..|.
Yeast   215 AVNFVLKQRQFPPGEQQHYIVYDMGSGSIKASMFSILQPEDTTQPVTIEFEGYGYNPHLGGAKFT 279

  Fly   233 NRLVTHLAEEFKRKY----KKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYT 293
            ..:.:.:..:|...:    ..:|.:||:||.::..|||:||..||:::||:|.|::|....||.|
Yeast   280 MDIGSLIENKFLETHPAIRTDELHANPKALAKINQAAEKAKLILSANSEASINIESLINDIDFRT 344

  Fly   294 KVSRARFEELCADLFRNTLQPVEKALNDA--KMDKG------QIHDIVLVGGSTRIPKVQSLLQE 350
            .::|..|||..||    :|..:.|.:|||  |...|      :|:.::|.|||:|||.||..|.:
Yeast   345 SITRQEFEEFIAD----SLLDIVKPINDAVTKQFGGYGTNLPEINGVILAGGSSRIPIVQDQLIK 405

  Fly   351 FFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAG-GVMTKLIER 414
            ....:.:..::|.||:...|..::...||  .|.|.:.:.:||.:..:...:.:. ..:..:..|
Yeast   406 LVSEEKVLRNVNADESAVNGVVMRGIKLS--NSFKTKPLNVVDRSVNTYSFKLSNESELYDVFTR 468

  Fly   415 NCRIPCKQTKTFSTYSDNQP-GVSIQVYEGER---AMTKDNNALGTFDLSGIPPAPRGVPQIEVT 475
            ....|.| |...:..:|:.| ..:|.::|..:   .:|.::.|:.....|  .....|| ...:|
Yeast   469 GSAYPNK-TSILTNTTDSIPNNFTIDLFENGKLFETITVNSGAIKNSYSS--DKCSSGV-AYNIT 529

  Fly   476 FDLDANGILNVS------AKEMSTGKAKNITIKNDKGRLS----QAEIDRM-------VNEAEKY 523
            |||.::.:.::.      ..|...|.:|.  |||...||:    ..||.|:       ::|..|.
Yeast   530 FDLSSDRLFSIQEVNCICQSENDIGNSKQ--IKNKGSRLAFTSEDVEIKRLSPSERSRLHEHIKL 592

  Fly   524 ADEDEKHR-QRITSRNALESYVFNVKQSVEQAPAGKLDEADKN---SVLDKCNETIR----WL-D 579
            .|:.:|.| |...:.|.|||.:::.:..:..      ||..:|   |.:::.:|.::    || |
Yeast   593 LDKQDKERFQFQENLNVLESNLYDARNLLMD------DEVMQNGPKSQVEELSEMVKVYLDWLED 651

  Fly   580 SNTTAEKEEFDHKMEEL 596
            ::...:.|:...::.|:
Yeast   652 ASFDTDPEDIVSRIREI 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BbNP_524927.2 PTZ00009 2..641 CDD:240227 154/667 (23%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 100/417 (24%)
LHS1NP_012850.1 HYOU1-like_NBD 23..430 CDD:212672 100/413 (24%)
Smc <581..737 CDD:224117 20/94 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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