DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp70Bb and hspa12a.3

DIOPT Version :9

Sequence 1:NP_524927.2 Gene:Hsp70Bb / 48582 FlyBaseID:FBgn0013278 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001038346.3 Gene:hspa12a.3 / 559031 ZFINID:ZDB-GENE-030131-8896 Length:571 Species:Danio rerio


Alignment Length:611 Identity:124/611 - (20%)
Similarity:231/611 - (37%) Gaps:165/611 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGV----YQHGKVEIIAN---DQGNRT--TPSYVAFTDSE--RLIG-DPAKNQV 56
            |.||.||:||...:    .|..:...|.|   :.|..|  ||:.:.|.:.|  :..| |......
Zfish     8 IAIDFGTSYSGYAISFKTKQPQESIQIPNWGVNFGYNTFKTPTCILFDEHETFQKFGYDAMMTYT 72

  Fly    57 AMNPRNT-----VFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEI 116
            ...|::.     :|:..::   :..|.:|..|:    .....:||:.| .:....||.|:    :
Zfish    73 RSTPKSQARKSFLFEHFKM---ELYDKEIHRDL----MITAKNGGQMK-ALTVFSESLRY----L 125

  Fly   117 SSMVLTKMKE--TAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNV------LRIINEP 173
            ....|.|:||  |.:.::...:| .|:||||.:|.:.:|..::|...|||.:      |....||
Zfish   126 KDHALEKIKENTTGKTFIASDVT-WVLTVPAIWNAAAKQFMREAAIEAGLVIESEPERLVFALEP 189

  Fly   174 TAAALAYGLDKNLKGERNV-----------------LIFDLGGGTFDVSI-LTIDEGSLFEVRST 220
            .||::   ..|.|..|..:                 ::.|.||||.|::: ..:::|.|.|:.:.
Zfish   190 EAASI---YCKQLPSEGYISEEACRDTLEQKPGTQYMVVDCGGGTIDITVHEVVEDGKLKELNAA 251

  Fly   221 AGDTHLGGEDFDNRLVTHLAEEFKRK-YKKDLRSNPRALRRLRTAAERAKR-----------TLS 273
            :|: .:||:..|.:.::.|.|.|..| |.|..:..|....:|:.....||.           ||.
Zfish   252 SGN-DMGGQTVDRKFISFLKEIFSEKIYNKFEQDFPAEALKLKYDIALAKSCDQLVLIQCPVTLQ 315

  Fly   274 SSTEATIEIDALFEGQDFYTKVSRARFEE------------LCADLFRNTLQPVEKALNDAKMDK 326
            ...:....|::.|||      |..|.::|            ...:..:.|.:.:||.:::.::: 
Zfish   316 DLAKKEKAIESYFEG------VEGAEWDEGSIIIKEDKLQSFFDESLKTTAEKLEKIMSNPELN- 373

  Fly   327 GQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPD---------------------EAVAYG 370
              |..::||||......::..|:|.|....:...:.|.                     .|:.||
Zfish   374 --IEYMLLVGGFAECKILKKFLKERFDKCKIVCPVEPQVVIIKGAIRYAKQPKVVKSRMSALTYG 436

  Fly   371 AAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTK----------- 424
            ..:.|........||...|.........:..||       .:.:...:.|.:.:           
Zfish   437 IRIDAPFDKVLHKGKTSYVNSEGQTYCDVCFET-------FVRKGESVNCDEVRQFFFNPSDTNQ 494

  Fly   425 ---TFSTYSDN--------QPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVP---QIEVT 475
               ||..:|.|        :|||               .::|.|.: |:|....|:.   ::|:.
Zfish   495 TFATFQFFSTNEKQVQFIDEPGV---------------ESVGVFQV-GMPKTDGGLSREIKLEIK 543

  Fly   476 FDLDANGILNVSAKEMSTGKAKNITI 501
            |   .:..:..:|.::.:|:..::.:
Zfish   544 F---GSTEMKATATDVDSGETTSVKL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BbNP_524927.2 PTZ00009 2..641 CDD:240227 124/611 (20%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 102/462 (22%)
hspa12a.3NP_001038346.3 HSPA12_like_NBD 6..420 CDD:212671 98/437 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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