DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp70Bb and Hspa12b

DIOPT Version :9

Sequence 1:NP_524927.2 Gene:Hsp70Bb / 48582 FlyBaseID:FBgn0013278 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001381945.1 Gene:Hspa12b / 311427 RGDID:1312004 Length:685 Species:Rattus norvegicus


Alignment Length:650 Identity:149/650 - (22%)
Similarity:235/650 - (36%) Gaps:204/650 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IIANDQGNRTTPSYVAF---TDSERLI-------GDPAKNQVAMNPRNT--------VFDAKRLI 71
            ::|.|.|  ||.|..||   ||.|.:.       |||.   ||.....|        :|.:....
  Rat    62 VVAIDFG--TTSSGYAFSFATDPEAIHMMRKWEGGDPG---VAHQKTPTCLLLTPEGIFHSFGYT 121

  Fly    72 GRKYD---DPKIAEDMKHW-PFKV----VSD----------GGKPKIGVEYKGESKRFAPEEISS 118
            .|.|.   ||:.|.|..:: .||:    .:|          .||..:.:|....:.||..|.   
  Rat   122 ARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKKMLALEVFAHALRFFKEH--- 183

  Fly   119 MVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGL------NVLRIINEPTAAA 177
             .|.:::|.:|..|.:.....|:||||.:....:|..::|.::|||      ..|.|..||.||:
  Rat   184 -ALQELREQSECMLEKDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDAEKLLIALEPEAAS 247

  Fly   178 L-----------------AYG--------LDKNLKGERNVL------------------------ 193
            :                 |.|        :|.:.:..|..|                        
  Rat   248 VYCRKLRLHQLMDLSSRTAGGGRLGERRSIDSSFRHAREQLRRSRHSRTFLVESGVGELWSEMQE 312

  Fly   194 -----IFDLGGGTFDVSILTIDE--GSLFEV-RSTAGDTHLGGED--FDNRLVTHLAEEFKRKYK 248
                 :.|.||||.|:::..:::  |:|.|: :::.|.....|.|  |:..|.....|:|..|:|
  Rat   313 GDRYMVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIAKFK 377

  Fly   249 KDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFE------------ 301
               |..|.|...|..|.|..|||........:.|...|...|||.|......|            
  Rat   378 ---RQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNFVK 439

  Fly   302 -----------ELCADLFRNT----LQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEF 351
                       |...:||:.|    :|.:|..|  ||.:...:..:.||||......:|..:||.
  Rat   440 WSSQGMLRMSCEAMNELFQPTVSGIIQHIEMLL--AKPEVQGVKLLFLVGGFAESAVLQHAVQEA 502

  Fly   352 FHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMT------- 409
            ...:.|.:.:..|..:   ..::.|:|.|...|    |:.|..:||:.|:    ||:.       
  Rat   503 LGNRGLRVVVPHDVGL---TILKGAVLFGQAPG----VVRVRRSPLTYGV----GVLNRFVPGHH 556

  Fly   410 ---KLIERNCRIPCKQTKTFS-----------------TYSDNQPG---VSIQVY----EGERAM 447
               ||:.|:.|..|  |..|.                 :|...:||   |.|.:|    |..|.:
  Rat   557 PPEKLLVRDGRRWC--TDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDARFI 619

  Fly   448 T----KDNNAL-------GTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITI 501
            |    :...||       |:.:.:|..|:.|.:.......|.:    :.|:|.::||.::....|
  Rat   620 TDPGVRKCGALSLELEPEGSPENTGTSPSRREIRAAMQFGDTE----IKVTAVDVSTNRSVRAAI 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BbNP_524927.2 PTZ00009 2..641 CDD:240227 148/649 (23%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 111/481 (23%)
Hspa12bNP_001381945.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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