DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and TCM62

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_009600.2 Gene:TCM62 / 852332 SGDID:S000000248 Length:572 Species:Saccharomyces cerevisiae


Alignment Length:642 Identity:109/642 - (16%)
Similarity:233/642 - (36%) Gaps:181/642 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRSCVPK-AITSSRCFARMYSKDVRFGSGVRAM--MIRGVDILADAVAVTMGPKGRSVIVERPW 62
            |.|:|:.| ....::|..:.....:.....::.:  .:.|:.:|..  .:|.....:::|.|..:
Yeast     1 MLRNCLRKLGNHQTKCSVKTLHTPIYRTKNLQVLRDTLSGIKLLEK--IITSSSYNKTLIYEPKY 63

  Fly    63 TS-PKITKDGFTVARSIALK--------DQHMN-------------LGAKLVQD-VADNTNESAG 104
            .| |::.....|:.....::        |:..|             :|.:|..| :.||.     
Yeast    64 KSKPQVVSSHDTMRLHNVMRELLDSLQVDEATNTRLQSNRPRKLGRVGLQLFMDCIQDNL----- 123

  Fly   105 DGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAVETREEIQQVA--- 166
              |.|:|.|..::.:..|..     ...|:..|:...:..::|.|.:....|:::.::..:.   
Yeast   124 --TATSTSLTCSLLEHYFKY-----PEKEVTNGIKAGLRYIRDFLAKNKIIVKSQNDVDALVEQL 181

  Fly   167 TLSANGDTEIGRLIGEATDKVGPRGTITVKDGKRLKDELNIIQGLRFDNG-------YVSPFFVN 224
            |:|::....|.|::.....::.....:.|.:|.:..||:::.:|.::..|       |:....:.
Yeast   182 TMSSSDSQSIKRVLKAINYELFSDDIVRVINGNKTYDEVDVSKGWKYPAGILDSNEAYLRSLELP 246

  Fly   225 SSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRP-LIIIAEDISGEALNALVLNK---- 284
            :.|...:: .:.||::....:...::|:..:..:.:.|:. |:|:..|.:|:||.::.:|.    
Yeast   247 TKKLVSID-KDMLVLMYDGTLRDANKILPTITYARKLRKSVLLIVNGDCTGDALTSVTINNNRNK 310

  Fly   285 --------------------------------LRLGLQVCAVKSPSYGHHRKELIGDISAATGAT 317
                                            |||.....::.||.|    ..|:.....|    
Yeast   311 RENNESRIVVLKYSKKANNDLAPQENLDFIKFLRLPCGYDSIYSPEY----SPLVPSKMCA---- 367

  Fly   318 IFGDDINYSKMEEAKLEDLGQVGEAVI--SKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPE 380
                |..|..:|..|    ...|||.:  |.|:..:....||:.|                    
Yeast   368 ----DKYYGSIESIK----ATTGEAFLYNSIDAEAIPNKVPKSFL-------------------- 404

  Fly   381 QRDRLRQRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRA-AIEEGIVPGGGTAFLRCIP 444
                         :....|.|||.:|:|::.:::.:.:.||.... .:.:|.:||.|.:.|:.||
Yeast   405 -------------QNTVTLSIGGHNEIEIDRRRNAIDNCLNNVLCHGLAKGFIPGYGISLLKAIP 456

  Fly   445 YLQELKTESADL--QKGVDIVCNALRMPCQTIAQNAGVDGPMVVAKVLNGSEDYGYD-------- 499
            .|.|||....:.  :.|::.|.:|:.:|.:...:||                 |||:        
Yeast   457 GLNELKANEPNFMTKVGINAVLSAVILPSEVAFKNA-----------------YGYNYYEINSLI 504

  Fly   500 --------------AMGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLSTTEVVIT 542
                          :...|....|:.|.::|...:.:.:........||::...:||
Yeast   505 AGAINEKSFPMAKFSPNSEPVNTVKDGNLEPWSKMDSCLAGVETFIELLTSCNTIIT 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 105/633 (17%)
GroEL 22..543 CDD:239460 104/620 (17%)
TCM62NP_009600.2 PTZ00114 124..492 CDD:185455 76/422 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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