DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and CPN60B

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001320637.1 Gene:CPN60B / 841996 AraportID:AT1G55490 Length:600 Species:Arabidopsis thaliana


Alignment Length:568 Identity:229/568 - (40%)
Similarity:352/568 - (61%) Gaps:19/568 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RSCVPKAITSSR---CFAR--MYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPW 62
            :|..|:...||.   |.|:  .::||   |:.:|.:. .||:.|||.|.||:|||||:|::|..:
plant    39 QSVCPRPRRSSSAIVCAAKELHFNKD---GTTIRRLQ-AGVNKLADLVGVTLGPKGRNVVLESKY 99

  Fly    63 TSPKITKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITM 127
            .||:|..||.||||.:.|:|...|:|||||:..|..||:.|||||||:.|||:....||...:..
plant   100 GSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAA 164

  Fly   128 GANPVEIRRGVMLAVDVVKDKLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGT 192
            |||||.|.||:......:..:||:|||.||. .|:..||.:||..:.|||.:|.||..|||.:|.
plant   165 GANPVLITRGIEKTAKALVTELKKMSKEVED-SELADVAAVSAGNNDEIGNMIAEAMSKVGRKGV 228

  Fly   193 ITVKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQ 257
            :|:::||..::.|.:::|::||.||:||:||..|:...|||.|..:::..||||....:|..||.
plant   229 VTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLED 293

  Fly   258 SLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDD 322
            ::|...|::||||||..|||..||:||||..|::.|:::|.:|..:.:.:.||:..||||:..::
plant   294 AIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREE 358

  Fly   323 INYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQ 387
            :..| :::|..|.||...:.|::|:::.::........::.|:.||:: |.|:..:..::::|.:
plant   359 VGLS-LDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKN-LIEQAEQDYEKEKLNE 421

  Fly   388 RLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELK-T 451
            |::.|:.||||:.:|..:|.|:.|||.||.||||||:||:|||||.|||...||....:..:| |
plant   422 RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAT 486

  Fly   452 ESADLQK-GVDIVCNALRMPCQTIAQNAGVDGPMVVAKVL-NGSEDYGYDAMGDEYCRLVEKGII 514
            ...|.:| |.|||..||..|.:.||:||||:|.:|..||| |.:..:||:|...:|..|:..|||
plant   487 LDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGII 551

  Fly   515 DPTKVLRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSGAGGGMDD 562
            |||||:|..:..||.||.....::.|:.:.:..:.:.    .|..||:
plant   552 DPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVP----VGNPMDN 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 224/556 (40%)
GroEL 22..543 CDD:239460 220/523 (42%)
CPN60BNP_001320637.1 PLN03167 1..600 CDD:215611 229/568 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.780

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