DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and Cpn60beta4

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_173947.1 Gene:Cpn60beta4 / 839164 AraportID:AT1G26230 Length:611 Species:Arabidopsis thaliana


Alignment Length:550 Identity:197/550 - (35%)
Similarity:332/550 - (60%) Gaps:11/550 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRSCVPKAITSSRCF---ARMYSKDVRFG--SGVRAMMIRGVDILADAVAVTMGPKGRSVIVERP 61
            ||.....:.:||..|   .|..:|:|.|.  ..|...:..|.|::|..:.||:|||||:|:::..
plant    18 FRKKPSSSSSSSPNFVLRVRAAAKEVHFNRDGSVTKKLQAGADMVAKLLGVTLGPKGRNVVLQNK 82

  Fly    62 WTSPKITKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQIT 126
            :..|:|..||.||.:.|.|:|...|:|.|||:.....||:.||||:||:.:||..:..||...|:
plant    83 YGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVIS 147

  Fly   127 MGANPVEIRRGVMLAVDVVKDKLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRG 191
            .|.||:::.||:......:..:||.||:.:|. .|:..||.:||..|.|:|.:|..|..:||..|
plant   148 AGTNPIQVARGIEKTTKALVLELKSMSREIED-HELAHVAAVSAGNDYEVGNMISNAFQQVGRTG 211

  Fly   192 TITVKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLE 256
            .:|::.||.|.:.|.|::|::|:.||:||:||...:..:.||.:..:::..||||....:.|.|:
plant   212 VVTIEKGKYLVNNLEIVEGMQFNRGYLSPYFVTDRRKREAEFHDCKLLLVDKKITNPKDMFKILD 276

  Fly   257 QSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGD 321
            .::::..|::|:||||..:||..::.|||:..|:|.|:|:|::|..:...:.|::..||||:..|
plant   277 SAVKEEFPVLIVAEDIEQDALAPVIRNKLKGNLKVAAIKAPAFGERKSHCLDDLAIFTGATVIRD 341

  Fly   322 DINYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLR 386
            ::..| :|:|..|.||.....:::||||:::........::.|:.||:: |.|...:..|:..|.
plant   342 EMGLS-LEKAGKEVLGTAKRVLVTKDSTLIVTNGFTQKAVDERVSQIKN-LIENTEENFQKKILN 404

  Fly   387 QRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELK- 450
            :|::.|:.|:|::.:|..::||:.:|:.:|.||||||::|||||||.|||.|.||....:..:| 
plant   405 ERVARLSGGIAIIQVGALTQVELKDKQLKVEDALNATKSAIEEGIVVGGGCALLRLATKVDRIKE 469

  Fly   451 -TESADLQKGVDIVCNALRMPCQTIAQNAGVDGPMVVAKVL-NGSEDYGYDAMGDEYCRLVEKGI 513
             .::.:.:.|.:|...||..|.:.||:||..:|.:|:.||| |.:..|||:|..::|..|:..||
plant   470 TLDNTEQKIGAEIFKKALSYPIRLIAKNADTNGNIVIEKVLSNKNTMYGYNAAKNQYEDLMLAGI 534

  Fly   514 IDPTKVLRTAITDAAGVASLLSTTEVVITD 543
            ||||||:|..:..|:.||....|::.|:.:
plant   535 IDPTKVVRCCLEHASSVAQTFLTSDCVVVE 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 195/542 (36%)
GroEL 22..543 CDD:239460 191/525 (36%)
Cpn60beta4NP_173947.1 chaperonin_like 1..576 CDD:295468 197/549 (36%)
PTZ00114 35..570 CDD:185455 192/532 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

Return to query results.
Submit another query.