DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and Cpn60alpha2

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_197383.1 Gene:Cpn60alpha2 / 832000 AraportID:AT5G18820 Length:575 Species:Arabidopsis thaliana


Alignment Length:529 Identity:205/529 - (38%)
Similarity:310/529 - (58%) Gaps:6/529 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RMYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKD 82
            |..:|.:.:|...|..:..|:|.|||||::|:||:||:|::....|. |:..||.|:|:||.|.|
plant    32 RAGAKRILYGKDSREKLQAGIDKLADAVSITLGPRGRNVVLAEKDTI-KVINDGVTIAKSIELPD 95

  Fly    83 QHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKD 147
            ...|.||.|:|:||...|||||||||||.:|||.:.|.|...|..|||.|.::.|:...|..:..
plant    96 TIENAGATLIQEVAIKMNESAGDGTTTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVR 160

  Fly   148 KLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKDGKRLKDELNIIQGLR 212
            .|:..|..|:.:.:|:.||::||..|..:|.||.|..:|:||.|.|:::.....:..:.:.:|::
plant   161 VLQMKSIPVQGKNDIKAVASISAGNDEFVGNLIAETVEKIGPDGVISIESSSTSETSVIVEEGMK 225

  Fly   213 FDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRPLIIIAEDISGEAL 277
            ||.||:||.|:.:.:.|.|||..|.::::.:|||...::|..||::.:...||:|||||||.|.|
plant   226 FDKGYMSPHFITNQEKSTVEFDKAKILVTDQKITSAKELVPLLEKTSQLSVPLLIIAEDISAEVL 290

  Fly   278 NALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEAKLEDLGQVGEA 342
            ..||:||.:..:.|..||.|.....:|.|:.||:..|||.....|:..|.| .|..:.||.....
plant   291 EILVVNKKQGLINVAVVKCPGMLDGKKALLQDIALMTGADYLSGDLGMSLM-GATSDQLGVSRRV 354

  Fly   343 VISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEV 407
            ||:.:||.::........::.||.|::.:|||.. ......::.:|::.||.||||:.:||.:|.
plant   355 VITANSTTIVADASTKPEIQARIAQMKKDLAETD-NSYLSKKIAERIAKLTGGVAVIKVGGHTET 418

  Fly   408 EVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRC---IPYLQELKTESADLQKGVDIVCNALRM 469
            |:.::|.|:.||.|||.||:.||||||||..::..   ||.:::...|.:..|.|.|||..||..
plant   419 ELEDRKLRIEDAKNATFAAMREGIVPGGGATYIHLLDEIPRIKKNLMEDSYEQIGADIVAMALTA 483

  Fly   470 PCQTIAQNAGVDGPMVVAKVLNGSEDYGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLL 534
            |...||.||||||.:||.|........||:||..:|..|:..||.||.:|.|.|:.:|..||.::
plant   484 PAMAIATNAGVDGSVVVQKTRELEWRSGYNAMSGKYEDLLNAGIADPCRVSRFALQNAVSVAGII 548

  Fly   535 STTEVVITD 543
            .||:.|:.:
plant   549 LTTQAVLVE 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 205/529 (39%)
GroEL 22..543 CDD:239460 204/523 (39%)
Cpn60alpha2NP_197383.1 GroEL 36..557 CDD:239460 204/523 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

Return to query results.
Submit another query.