DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and HSP60

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_189041.1 Gene:HSP60 / 821983 AraportID:AT3G23990 Length:577 Species:Arabidopsis thaliana


Alignment Length:584 Identity:273/584 - (46%)
Similarity:390/584 - (66%) Gaps:29/584 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KAITSSRCFARMY-SKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDG 71
            :.::|...::|.| :|:::||...||:|::||:.|||||.||||||||:|::|:.|.:||:||||
plant    19 RQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKVTMGPKGRNVVIEQSWGAPKVTKDG 83

  Fly    72 FTVARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRR 136
            .|||:||..||:..|:||.||:.||:.||:.||||||.||||.|||..||...:..|.|.:::||
plant    84 VTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMNAMDLRR 148

  Fly   137 GVMLAVDVVKDKLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKDGKRL 201
            |:.:|||.|...||..::.:.|.|||.||.|:||||:.|||.||.:|.:|||..|.||::|||.|
plant   149 GISMAVDAVVTNLKSKARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTL 213

  Fly   202 KDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRPLI 266
            .:||.:::|::.|.||.||:|:.:.|..|.|..:.|::|..|||:.::.|||.||.:|:::|||:
plant   214 FNELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISSINSIVKVLELALKRQRPLL 278

  Fly   267 IIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEA 331
            |::||:..:||..|:|||||.|::|||:|:|.:|.:||..:.|::|.||..:..|::..: :|:.
plant   279 IVSEDVESDALATLILNKLRAGIKVCAIKAPGFGENRKANLQDLAALTGGEVITDELGMN-LEKV 342

  Fly   332 KLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALTKGV 396
            .|..||...:..:|||.|::|.|......:|.|.:||:..: |.......:::|::||:.|:.||
plant   343 DLSMLGTCKKVTVSKDDTVILDGAGDKKGIEERCEQIRSAI-ELSTSDYDKEKLQERLAKLSGGV 406

  Fly   397 AVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELKTESADLQKGVD 461
            |||.|||.||.||.||||||.||||||:||:||||:||||.|.|.....|::|.|.:.|.:.||.
plant   407 AVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGILPGGGVALLYAARELEKLPTANFDQKIGVQ 471

  Fly   462 IVCNALRMPCQTIAQNAGVDGPMVVAKVL-NGSEDYGYDAMGDEYCRLVEKGIIDPTKVLRTAIT 525
            |:.|||:.|..|||.||||:|.::|.|:| ..:.|.||||...||..:|:.|||||.||:|||:.
plant   472 IIQNALKTPVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALV 536

  Fly   526 DAAGVASLLSTTEVVITDSRNDDLLSKLSGAGGGMDDGLDMNMGGLEELAALSGLGGMGGMGGM 589
            |||.|:|||:|||.|:.|...|:   ..|||.|                      .||||||||
plant   537 DAASVSSLLTTTEAVVVDLPKDE---SESGAAG----------------------AGMGGMGGM 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 264/550 (48%)
GroEL 22..543 CDD:239460 256/521 (49%)
HSP60NP_189041.1 GroEL 34..554 CDD:239460 256/521 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 580 1.000 Domainoid score I40
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 652 1.000 Inparanoid score I167
OMA 1 1.010 - - QHG61846
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 1 1.000 - - mtm993
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.