DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60B and HSP60-3A

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_566466.1 Gene:HSP60-3A / 820599 AraportID:AT3G13860 Length:572 Species:Arabidopsis thaliana


Alignment Length:540 Identity:250/540 - (46%)
Similarity:360/540 - (66%) Gaps:6/540 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RSCVPKAITSSRCFARMYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKI 67
            |..|...|.|||.:|   :||:.||.|.||.|::||..:|:||.||||||||:||:|..:..|||
plant    18 RKLVSGRIISSRNYA---AKDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKI 79

  Fly    68 TKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPV 132
            ||||.|||:||:.:.:..|:||:||:.||..||:.||||||.||||.:||..||...:..|.|.:
plant    80 TKDGVTVAKSISFQAKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILIEGCKSVAAGVNVM 144

  Fly   133 EIRRGVMLAVDVVKDKLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKD 197
            ::|.|:.:|:..|...||..:..:.|.|||.||||:||||:.|||.||..|.:|||..|.|||.|
plant   145 DLRVGINMAIAAVVSDLKSRAVMISTPEEITQVATISANGEREIGELIARAMEKVGKEGVITVAD 209

  Fly   198 GKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQR 262
            |..|.:||.:::|::...||:||:|:...|..|.|..|.:::|..|||:.::.::|.||.:::..
plant   210 GNTLDNELEVVEGMKLARGYISPYFITDEKTQKCELENPIILIHEKKISDINSLLKVLEAAVKSS 274

  Fly   263 RPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSK 327
            |||:|:|||:..:||..|:|||...||:|||:|:|.:|.:||..:.|::..|||.:..::...| 
plant   275 RPLLIVAEDVESDALAMLILNKHHGGLKVCAIKAPGFGDNRKASLDDLAVLTGAEVISEERGLS- 338

  Fly   328 MEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSAL 392
            :|:.:.|.||...:..:::|.|::|.|.....|:|.|.:::: ...||......:::.::|||.|
plant   339 LEKIRPELLGTAKKVTVTRDDTIILHGGGDKKLIEERCEELR-SANEKSTSTFDQEKTQERLSKL 402

  Fly   393 TKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELKTESADLQ 457
            :.||||..:||.||.||.|:||||.|||||||||:||||:||||.|.|.....|..|:||:.|.:
plant   403 SGGVAVFKVGGASESEVGERKDRVTDALNATRAAVEEGIIPGGGVALLYATKALDNLQTENEDQR 467

  Fly   458 KGVDIVCNALRMPCQTIAQNAGVDGPMVVAKVLNGSE-DYGYDAMGDEYCRLVEKGIIDPTKVLR 521
            :||.||.|||:.|..|||.|||.||.:||.|:|...: ::|:||...:|..:|:.|||||.||:|
plant   468 RGVQIVQNALKAPAFTIAANAGYDGSLVVGKLLEQDDCNFGFDAAKGKYVDMVKAGIIDPVKVIR 532

  Fly   522 TAITDAAGVASLLSTTEVVI 541
            ||:||||.|:.||:|||..:
plant   533 TALTDAASVSLLLTTTEASV 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 248/534 (46%)
GroEL 22..543 CDD:239460 243/521 (47%)
HSP60-3ANP_566466.1 PTZ00114 20..570 CDD:185455 249/538 (46%)
GroEL 34..552 CDD:239460 243/519 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 580 1.000 Domainoid score I40
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 652 1.000 Inparanoid score I167
OMA 1 1.010 - - QHG61846
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 1 1.000 - - mtm993
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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