DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and TCP1

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_110379.2 Gene:TCP1 / 6950 HGNCID:11655 Length:556 Species:Homo sapiens


Alignment Length:604 Identity:130/604 - (21%)
Similarity:226/604 - (37%) Gaps:166/604 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKL 91
            |..:|:..:.....:|:.|..::||.|...::........||.||.|:.:  .|:.:|.  .||:
Human    14 GETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK--LLEVEHP--AAKV 74

  Fly    92 VQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAV 156
            :.::||..::..|||||:..::|..:.|.....:....:|..:..|..||               
Human    75 LCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA--------------- 124

  Fly   157 ETREEIQQV-ATLSANGDTEIGR--LIGEATDKVGPRGTITVKDGKRLKDELNIIQGLRFDNGYV 218
             .:|.::.: ..|..|.| |:||  ||..|...:..:                 |.|:..|    
Human   125 -CKEAVRYINENLIVNTD-ELGRDCLINAAKTSMSSK-----------------IIGINGD---- 166

  Fly   219 SPFFVNSSKGSKVEFANALVMISLKKITGLSQ-------IVKGLEQSLRQRRPLIIIAEDISGEA 276
              ||.|.       ..:|::.|....|.|..:       |:|...:|  |...::     |||.|
Human   167 --FFANM-------VVDAVLAIKYTDIRGQPRYPVNSVNILKAHGRS--QMESML-----ISGYA 215

  Fly   277 LNALV----------------------LNKLRLGLQVCAVKSPSYGHHRKELIGDIS-------A 312
            ||.:|                      ..|::||:|| .:..|......::...||:       .
Human   216 LNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQV-VITDPEKLDQIRQRESDITKERIQKIL 279

  Fly   313 ATGATIF----G-DDINYSKMEEAKL--------EDLGQVGEAVISKDSTML-----LQGKP--K 357
            ||||.:.    | ||:......||..        .||.::.:|   ..:|:|     |:|:.  :
Human   280 ATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKA---SGATILSTLANLEGEETFE 341

  Fly   358 TGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNA 422
            ..:|....:.:|:.:.:.::...:..:.|...|.:.:        |.::...:|.:..:.|||..
Human   342 AAMLGQAEEVVQERICDDELILIKNTKARTSASIILR--------GANDFMCDEMERSLHDALCV 398

  Fly   423 TRAAIE-EGIVPGGGTAFLRCIPYLQELKTES--------ADLQKGVDIVCNALRMPCQTIAQNA 478
            .:..:| :.:|||||........||:...|..        |:..:.:.::.|       |:|.||
Human   399 VKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPN-------TLAVNA 456

  Fly   479 GVDGPMVVAKV--------LNGSED----YGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAAGVA 531
            ..|...:|||:        :|....    .|.|....:.....:.|:.:||.|         .|.
Human   457 AQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIV---------KVK 512

  Fly   532 SLLSTTEVVITDSRNDDLL 550
            ||...||..||..|.|||:
Human   513 SLKFATEAAITILRIDDLI 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 130/604 (22%)
GroEL 22..543 CDD:239460 125/595 (21%)
TCP1NP_110379.2 TCP1_alpha 9..535 CDD:239451 130/604 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.