DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and cct7

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001032347.1 Gene:cct7 / 407957 XenbaseID:XB-GENE-988120 Length:542 Species:Xenopus tropicalis


Alignment Length:573 Identity:126/573 - (21%)
Similarity:228/573 - (39%) Gaps:105/573 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKLVQDVADNT 99
            |....::|:||..|:||:|...::........|:.||.|:.:.:.:    ::..||.:.|:|.:.
 Frog    26 INACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATILKLLDV----VHPAAKTLVDIAKSQ 86

  Fly   100 NESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAVETREEIQQ 164
            :...|||||:.|:||....|:....:..|.:|..|.|....|..:...|::|::..|:..::.:|
 Frog    87 DAEVGDGTTSVTLLAAEFMKQVKPYVEEGLHPQIIIRAYRTATQLAVGKIREIAVTVKKEDKEEQ 151

  Fly   165 VATLSANGDTEI-GRLIGEATDKVGPRGTITVKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKG 228
            ...|.....|.: .:||....|....    .|.|...|.|:|..::.:.          :...:|
 Frog   152 RLLLEKCAATALSSKLIALQKDFFAK----MVVDAVSLLDDLLQLKMIG----------IKKVQG 202

  Fly   229 SKVEFANALVMISLKKITGLSQIVKGLE-QSLRQRRP---LIIIAEDISGEALNALV-------- 281
            ..:|.::.:..::.||....:    |.| |..:...|   |:.:..::..|..||.|        
 Frog   203 GALEDSHLVAGVAFKKTFSYA----GFEMQPKKYESPKISLLNVELELKAEKDNAEVRVSNIEDY 263

  Fly   282 --------------LNKL-RLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEA 331
                          |.|: :.|.:|...|.|         |||::    ...|.|          
 Frog   264 QAIVDAEWNILYDKLEKIYKSGAKVVLSKLP---------IGDVA----TQYFAD---------- 305

  Fly   332 KLEDL---GQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDEL-------AEKQIKPEQRDRLR 386
              .||   |:|.|..:.:  ||:..|    |.::..:..:.|::       .|.|:..|:.:...
 Frog   306 --RDLFCAGRVPEEDLKR--TMMACG----GSIQTSVNALTDDVLGHCALFEEAQVGGERYNFFT 362

  Fly   387 QRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIE-EGIVPGGGTAFLRCIPYLQEL- 449
            ....|.|   ..:.:.||:|..:.|.:..:.||:...|.||: :.:|.|||...:....||::. 
 Frog   363 GCPKAKT---CTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYS 424

  Fly   450 KTESADLQKGVDIVCNALRMPCQTIAQNAGVDGPMVV----AKVLNGSEDYGYDAMGDEYCRLVE 510
            :|.....|..:.....||.:..:.:..|||.|...::    ||...|...||.|...::.....:
 Frog   425 RTIPGKQQLLIGSYAKALEIIPRQLCDNAGFDATNILNKLRAKHAQGGMWYGVDVNNEDIADNFD 489

  Fly   511 KGIIDPTKVLRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSGAGGGMDDG 563
            ..:.:|..|...|:|.|:..|.|:.:.:..|.:.|     |.:.||..|...|
 Frog   490 ACVWEPAIVRINALTAASEAACLVLSVDETIKNPR-----SSMDGAPAGRGRG 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 124/566 (22%)
GroEL 22..543 CDD:239460 120/551 (22%)
cct7NP_001032347.1 TCP1_eta 5..525 CDD:239456 121/559 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.