DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and cct4

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_956877.1 Gene:cct4 / 393555 ZFINID:ZDB-GENE-040426-1421 Length:533 Species:Danio rerio


Alignment Length:566 Identity:121/566 - (21%)
Similarity:240/566 - (42%) Gaps:105/566 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKLVQD 94
            :|...|.....:|||:..::||||...:::.......||.||.|:.:.:    |.::..||::.:
Zfish    27 IRYSNINAGKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQM----QVLHPAAKMMVE 87

  Fly    95 VADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSK--AVE 157
            ::...:..||||||:..|:|.|:.......:..|.:|..|......|||...:.|..:|.  .:.
Zfish    88 LSKAQDIEAGDGTTSVVVIAGALLDACAKLLQKGIHPTIISESFQKAVDKGVEVLTSISTPLLLS 152

  Fly   158 TREEIQQVATLS------ANGDTEIGRLIGEATDKVGPRGTITVKDGKRLKDELNIIQGL----- 211
            .||.:...|:.|      :...:.:..:..:|..||....|.|..|   |:| :|:::.|     
Zfish   153 DRESLLNSASTSLCSKVVSQNSSLLAPMSVDAVMKVIDPATATSVD---LRD-INVVKKLGGTID 213

  Fly   212 --RFDNGYVSPFFVNSSKGSKVEFAN-ALVMISLK--KITGLSQIVKG----LEQSLRQRRPLII 267
              ...:|.|....|.|:..|:||.|. .|:...|.  |....:|||..    :::.||:.|..|:
Zfish   214 DCELVDGMVLTQRVASTGVSRVEKAKIGLIQFCLSPPKTDMDNQIVVSDYAQMDRVLREERAYIL 278

  Fly   268 -IAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEA 331
             :.:.:.......|::.|..|                ::.:.|:     |..|.:.:....:::.
Zfish   279 NLVKQVKKAGCTVLLIQKSIL----------------RDALSDL-----ALHFLNKMKIMVIKDI 322

  Fly   332 KLEDLGQVGEAVISKDSTMLLQGKPK-TGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALT-- 393
            :.|::..:.:.:.:|....:.|..|: .|..|: ::::..:.:.|.:|             :|  
Zfish   323 EREEIEFICKTIGTKPIAHIDQFTPEMLGSAEL-VEEVSLDGSGKLVK-------------ITGC 373

  Fly   394 ----KGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEE-GIVPGGGT----AFLRCIPYLQEL 449
                |.|::: :.|.:::.:.|.:..:.|||...|..::: .::.|||.    ..||...|.:.|
Zfish   374 ASPGKTVSIV-VRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLAEYARSL 437

  Fly   450 KTESADLQKGVDIVC-----NALRMPCQTIAQNAGVDGPMVVAKVLN----GSEDYGYDAMGDEY 505
                    .|::..|     :||.:...|:|:|||::....|.::.|    |....|.:......
Zfish   438 --------GGMEAYCVRAYADALEVIPSTLAENAGLNPISTVTELRNRHAQGETTAGINVRKGGI 494

  Fly   506 CRLVEKGIIDPTKVLRTAITDAAGVASLLSTTEVVITDSRNDDLLS 551
            ..::|:.::.|..|..:|:|.|         ||.|.:..:.|||::
Zfish   495 SNILEELVVQPLLVSISALTLA---------TETVRSILKIDDLVN 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 121/566 (21%)
GroEL 22..543 CDD:239460 118/556 (21%)
cct4NP_956877.1 TCP1_delta 20..532 CDD:239454 121/566 (21%)
Cpn60_TCP1 38..533 CDD:278544 119/555 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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