DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and Cct6b

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_017452911.1 Gene:Cct6b / 363658 RGDID:1359453 Length:543 Species:Rattus norvegicus


Alignment Length:576 Identity:121/576 - (21%)
Similarity:222/576 - (38%) Gaps:147/576 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESAGD 105
            |.|.:..::||||...::.......|:||||..:...:.:  ||..  |.::..||...:...||
  Rat    30 LQDVLRPSLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQI--QHPT--ASIIAKVAAAQDHITGD 90

  Fly   106 GTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAVETREEIQQ-----V 165
            |||:..::...:.|:....|:.|.:|..|..|    .||.|.|..|:...::.::|:::     |
  Rat    91 GTTSNVLIIGELLKQADLYISEGLHPRIIAEG----FDVAKTKALEVLDKIKVQKEMKREMLLDV 151

  Fly   166 A--TLSANGDTEIGRLIGEA-TDKV------G-PRGTITVKDGK-RLKDELN------------- 206
            |  :|.....||:..::.|| .|.|      | |.....|:..: |.|.|.:             
  Rat   152 ARTSLRTKVHTELADILTEAVVDSVLAIRRPGIPIDLFMVEIVEMRHKSETDTQAGDRTQGLALP 216

  Fly   207 -IIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISL-------------KKITGLSQIVKGLEQ 257
             :::||..|:|...|......:.:.:...|    :||             |.:....::||...:
  Rat   217 RLVRGLVLDHGARHPRMKKQVQDAYILICN----VSLEYEKTEVSSGFFYKTVEEKEKLVKAERK 277

  Fly   258 SLRQR-RPLIIIAEDISGEALNALVLNKLR----LGLQVCAVKS-PSYGHHRKELIGDISAATGA 316
            .:..| :.:|.:.:.:..|:....|:...:    :.|::.|..: .:....::..:..::.|.| 
  Rat   278 FIEDRVQKIIDLKQKVCAESNKGFVVINQKGIDPVSLEMLAKHNIVALRRAKRRNLERLTLACG- 341

  Fly   317 TIFGDDINYSKMEEAKLEDLGQ--VGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKP 379
               |..:|       .||||.:  :|.|.:..:.|:   |:.|...:|..:..:.          
  Rat   342 ---GLAVN-------SLEDLSEECLGHAGLVFEYTL---GEEKFTFIEDCVNPLS---------- 383

  Fly   380 EQRDRLRQRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEG-IVPGGGTA----- 438
                             ..|.:.|.::..:.:.||.:.|.|.|.:.|||:| :|||.|..     
  Rat   384 -----------------VTLLVKGPNKHTLIQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIA 431

  Fly   439 -----FLRCIPYLQELKTESADLQKGVDIVCNALRMPCQTIAQNAGVDGPMVVAKV----LNGSE 494
                 :..|:.....|         |:....:||.:..:.:|||:|.|....:.|:    ....|
  Rat   432 EALVNYKHCVQGRARL---------GIQAFADALLIIPKVLAQNSGYDLQETLIKIQTKHAESKE 487

  Fly   495 DYGYD------------AMGDEYCRLVEKGIIDPTKVLRT--AITD---AAGVASL 533
            ..|.|            .:.|.||  |:|.|:....|:.|  .:.|   .||::||
  Rat   488 LVGIDLNTGEPMVAAEAGIWDNYC--VKKHILHSCTVIATNVLLVDEIMRAGMSSL 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 121/576 (21%)
GroEL 22..543 CDD:239460 121/576 (21%)
Cct6bXP_017452911.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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