DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and CCT8

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster


Alignment Length:648 Identity:131/648 - (20%)
Similarity:229/648 - (35%) Gaps:199/648 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VPKAITSSRCF---ARMYSKDVRFGSGVRAMMIRGVDI---LADAVAVTMGPKGRSVIVERPWTS 64
            ||||...|:..   ||||       ||:...:.|.:..   .|..:....||.|.:.::......
  Fly     5 VPKAPGVSQMLKDGARMY-------SGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEK 62

  Fly    65 PKITKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGA 129
            ..:|.|..|:.|.:.::    :..|||:...:...:...||||....|||.|:.:.....:.:|.
  Fly    63 QFVTSDAGTIMRELDVE----HPAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGI 123

  Fly   130 NPVEIRRGVMLAVD--------VVKDKLKEMSKAVETREEIQQVATLSANGDTE--IGRLIGEAT 184
            ...||..|...|::        :|..|:::. :.||..:|:.:.:.:|.....|  :..|:.:|.
  Fly   124 TTAEISDGYEKALEKALEILPNLVSHKIEDY-RNVEKVKEVLRTSIMSKQYGQEDFLNDLVSKAC 187

  Fly   185 DKVGP-RGTITVKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITG- 247
            ..:.| .||..|                  ||                        |.:.||.| 
  Fly   188 VSILPDEGTFNV------------------DN------------------------IRICKILGS 210

  Fly   248 ---LSQIVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGD 309
               .|::|:|:           :....:.|:...|   .|.::.:..|.|..             
  Fly   211 GLTKSEVVRGM-----------VFKRFVEGDVTYA---EKAKIVIFSCPVDI------------- 248

  Fly   310 ISAATGATIF---GDD-INYSKMEEAKLED----LGQVGEAVI---SKDSTMLLQGKPKTGLLEM 363
            |...|..|:.   .|: :::|..||:.||.    :...|..|:   .|...|.|....|.||:.:
  Fly   249 IQTETKGTVLIKSADELLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAV 313

  Fly   364 RIQQ----------------------IQDEL--AEKQIKPEQRDR--LRQRLSALTKGVAVLHIG 402
            |:..                      .|:||  .:|....|..|.  :..|.......:|.:.|.
  Fly   314 RLNSKFDLRRLSRSVNATVLPRITTPSQEELGYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIR 378

  Fly   403 GGSEVEVNEKKDRVVDALNATRAAIEEG-IVPGGGTAFLRCIPYLQELKTE---SADLQKGVD-- 461
            |.::..:::.:..:.||:|..:....:| .:||.|...:       ||.|:   .||...|:|  
  Fly   379 GATDNFMDDIERALDDAINNFKCLTRDGRYLPGAGATEI-------ELATQLSAYADTLPGLDQY 436

  Fly   462 ---IVCNALRMPCQTIAQNAGVDGPMVVAKVL-----NGSEDYGYDAMGDEYCRLVEKGIIDPTK 518
               ...|||.:..:.:|:|:|::|..:|.::.     ...:..|:|...:      :...||.||
  Fly   437 AVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIEAE------KASTIDTTK 495

  Fly   519 V------------LRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSGAGG-------GMDD 562
            .            |:.|:    |.|:.:...:.:|...|          |||       |.||
  Fly   496 AKLFDLYQSKFWGLKYAV----GAAATILKVDQIIMAKR----------AGGPKVRQAAGSDD 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 123/632 (19%)
GroEL 22..543 CDD:239460 115/601 (19%)
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 118/606 (19%)
Cpn60_TCP1 40..529 CDD:278544 112/579 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453433
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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