DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and cct5

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:570 Identity:116/570 - (20%)
Similarity:222/570 - (38%) Gaps:113/570 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SGVRAMM--IRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAK 90
            :|:.|:.  |.....:|:.:..::||.|...::........:|.||.|:   :::.|....: ||
Zfish    29 TGLEALKSHILAAKAVANTLRTSLGPNGLDKMMVDKDGEVTVTNDGATI---LSMMDVDHQI-AK 89

  Fly    91 LVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKA 155
            |:.:::.:.::..|||||...|||.|:.::....:..|.:|:.|..|...|..:..::|.::..:
Zfish    90 LMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYDQAAKIAIEQLDKIGDS 154

  Fly   156 V----ETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKD-----------------GK 199
            .    ...|.:.|.| ::..|...|.|...:..: :.....:||.|                 |.
Zfish   155 FPVDPNNTESLVQTA-MTTLGSKVINRCHRQMAE-IAVNAILTVADMERKDVDFELIKVEGKVGG 217

  Fly   200 RLKDELNIIQGLRFDNGYVSPFFVNSSKGSKV------------EFANALVMISLKKITGLSQIV 252
            :|:| ..:|:|:..|..:..|......|.:|:            :..:.|.:.|::....|.:..
Zfish   218 KLED-TQLIKGVIVDKEFSHPQMPKVLKDTKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYE 281

  Fly   253 KG-LEQSLRQRRP----LIIIAEDISGEALNALVLNKLRLGLQVCAVKSPS---YGHHRKELIGD 309
            |. .::.:||.:.    |.|.......||.:.|:.|:|           |:   .|....||   
Zfish   282 KDKFQEMIRQVKENGANLAICQWGFDDEANHLLLQNEL-----------PAIRWVGGPEIEL--- 332

  Fly   310 ISAATGATIFGDDINYSKMEEAKLEDLGQVGEAVI--SKDSTMLLQGKPKTGLLEMRIQQIQDEL 372
            |:.|||..|..   .:.::...||...|.|.|...  :||..::             |::.::..
Zfish   333 IAIATGGRIVP---RFCELTPEKLGTAGLVKEICFGTTKDRMLV-------------IEECKNSR 381

  Fly   373 AEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEG-IVPGGG 436
            |                       ..:.|.||:::.:.|.|..:.|||...|..:.:. ||.|||
Zfish   382 A-----------------------VTIFIRGGNKMIIEEAKRALHDALCVIRNLVRDNRIVYGGG 423

  Fly   437 TAFLRCIPYLQELKTESADL-QKGVDIVCNALRMPCQTIAQNAGVDGPMVVAKVLNGSEDYGYDA 500
            .:.:.|...:.|...:...| |..:....:||.:....:|:|:|::....:.:|..........|
Zfish   424 ASEIACALAVNEAADKCPSLEQYAMRAFADALEVIPMALAENSGLNPIQTMTEVRARQVKENNSA 488

  Fly   501 MGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLS-TTEVVITDSRNDDL 549
            :|.: |..:....:....|:.|.|    |....:| .|:||....:.||:
Zfish   489 LGID-CLHLSTNDMKQQHVIETLI----GKKQQISLATQVVKMILKIDDI 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 116/570 (20%)
GroEL 22..543 CDD:239460 114/562 (20%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 116/570 (20%)
Cpn60_TCP1 44..533 CDD:278544 112/553 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.