DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and Hsp60A

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster


Alignment Length:597 Identity:370/597 - (61%)
Similarity:457/597 - (76%) Gaps:27/597 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRSCVPKAITS-SRCFA-RMYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWT 63
            |||..|..|.:| ||..| |.|:||||||..|||||::|||:||||||||||||||:||:|:.|.
  Fly     1 MFRLPVSLARSSISRQLAMRGYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWG 65

  Fly    64 SPKITKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMG 128
            ||||||||.|||:||.|||:..|:|||||||||:||||.||||||||||||||||||||.:|:.|
  Fly    66 SPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKG 130

  Fly   129 ANPVEIRRGVMLAVDVVKDKLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTI 193
            ||||||||||||||:.|||.||.||:.|.|.|||.||||:|||||..||.||.||..|||..|.|
  Fly   131 ANPVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVI 195

  Fly   194 TVKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQS 258
            ||||||.|.|||.:|:|::||.||:||:|:|||||:||||.:||:::|.|||:.:..|:..||.:
  Fly   196 TVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALELA 260

  Fly   259 LRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDI 323
            ..||:||:||||||.||||:.||:|:|::||||.|||:|.:|.:||..:.|::.|:|..:||||.
  Fly   261 NAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDA 325

  Fly   324 NYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQR 388
            :..|:|:.|:.|||||||.||:||.|:||:||.|...:..|..||:|:: |......::::|::|
  Fly   326 DLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRANQIKDQI-EDTTSEYEKEKLQER 389

  Fly   389 LSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELKTES 453
            |:.|..|||:|.:||.||||||||||||.|||||||||:|||||||||||.||||..|:.::|.:
  Fly   390 LARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETTN 454

  Fly   454 ADLQKGVDIVCNALRMPCQTIAQNAGVDGPMVVAKVLNGSEDYGYDAMGDEYCRLVEKGIIDPTK 518
            .|.:.||:||..||||||.|||:||||||.||||||.|.:.||||||:..||..|:|||||||||
  Fly   455 EDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIIDPTK 519

  Fly   519 VLRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSGAGGGMDDGLDMNMGGLEELAALSGLGGM 583
            |:|||||||:||||||:|.|.|:|:...:|      ||                  .|:.|:|||
  Fly   520 VVRTAITDASGVASLLTTAEAVVTEIPKED------GA------------------PAMPGMGGM 560

  Fly   584 GGMGGMGGMGGM 595
            ||||||||||||
  Fly   561 GGMGGMGGMGGM 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 349/550 (63%)
GroEL 22..543 CDD:239460 338/520 (65%)
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 345/537 (64%)
GroEL 24..544 CDD:239460 338/520 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449861
Domainoid 1 1.000 580 1.000 Domainoid score I40
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 652 1.000 Inparanoid score I167
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183447at33208
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 1 1.000 - - otm51386
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - P PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1504
1110.800

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