DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60B and Mkks

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001008354.1 Gene:Mkks / 311456 RGDID:1308814 Length:570 Species:Rattus norvegicus


Alignment Length:527 Identity:99/527 - (18%)
Similarity:162/527 - (30%) Gaps:204/527 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CVPKAITSSRCFARMYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITK 69
            |..:.:||.|               ||:.:    .:|...:|...||.||               
  Rat    12 CKTEPLTSER---------------VRSTL----SVLKGIIASCYGPSGR--------------- 42

  Fly    70 DGFTVARSIALKDQHMNLGA-----------------------KLVQDVADNTNESAGDGTTTAT 111
                      ||..|..||.                       .|...|.::....:..|..||.
  Rat    43 ----------LKQLHNGLGGCVCTTSQSSALLRNLSVTHPILKVLTSSVQNHVCCFSDCGLFTAI 97

  Fly   112 V---LARAIAKEG--------FNQITMGAN-------------PVEIRRGVMLAVDVVKDKLKEM 152
            :   |...|.:.|        .|:..:|.:             ||:. |.....:::|...|...
  Rat    98 LCCNLIENIQRIGLTPTTAIKLNKYLLGLSISYLKSEACSCRIPVDF-RSTHTFLNLVHSILTSK 161

  Fly   153 SKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKDGKRLKDELNIIQGLRFDNGY 217
            ...:.||:||.           .||.||.:|.       .:|:.:..    |..::.|    ...
  Rat   162 PACMLTRKEID-----------HIGALILKAF-------LLTIPESA----EERMVLG----KSI 200

  Fly   218 VSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRPLIIIAEDISGEALNALVL 282
            :.|.     ||.:|..:..|        .||  :::..|..||:..|              ....
  Rat   201 IVPL-----KGQQVTDSTVL--------PGL--LIEASEVQLRRLLP--------------TQKS 236

  Fly   283 NKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYS-KMEEAKLEDLGQVGEAVISK 346
            :.||:.| .||           .|.||.|.|...|:.   ::|. .:|.|.||.|..:|..::|.
  Rat   237 STLRVAL-FCA-----------SLSGDFSNAGEGTLV---VHYQVSLENAVLEQLLNLGRQLVSD 286

  Fly   347 DSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEVEVNE 411
            ...::|..|    ::...::|.   |:|.||                  :|:..:|    |.:.|
  Rat   287 HVDLVLCQK----VIHPSLKQF---LSEHQI------------------IAIDRVG----VTLME 322

  Fly   412 KKDRVVDA---------LNATRAAIEE-GIVPGGGTAFLRCIPYLQELKTESADLQKGVDIVCNA 466
            ...:|..|         ::.|..:::: .....|...|...:|  .|....|..|....|.....
  Rat   323 PLSKVTGATPIGSLYPIVSTTYGSVKDVRSARFGSKYFFHLLP--NEATICSLLLCSRNDTAWEE 385

  Fly   467 LRMPCQT 473
            |::.|||
  Rat   386 LKLTCQT 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 98/523 (19%)
GroEL 22..543 CDD:239460 95/510 (19%)
MkksNP_001008354.1 Cpn60_TCP1 29..569 CDD:278544 93/491 (19%)
chaperonin_like 32..456 CDD:295468 92/488 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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