DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and Cct3

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_954522.1 Gene:Cct3 / 295230 RGDID:735038 Length:545 Species:Rattus norvegicus


Alignment Length:586 Identity:121/586 - (20%)
Similarity:224/586 - (38%) Gaps:121/586 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKL 91
            |..|::..|.....:||.:...:|||....::..|.....:|.||..:.|.|.:  ||.  .||.
  Rat    19 GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQV--QHP--AAKS 79

  Fly    92 VQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAV 156
            :.:::...:|..|||||:..:||..:.....:.:....:|..:.....:|:|.:...||::|..|
  Rat    80 MIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMVSTLKKISTPV 144

  Fly   157 ETREEIQQVATLSANGDTEI-----GRLIGEATDKV-------GPRGTITVKDGKRLK------- 202
            :.......:..::::..|::     ......|.|.|       ..|..|.:|...|::       
  Rat   145 DVNNRDMMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGII 209

  Fly   203 DELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQ----------------- 250
            ::..:::|:..:.....|......|..::    .|:..||:...|.||                 
  Rat   210 EDSCVLRGVMINKDVTHPRMRRYIKNPRI----VLLDSSLEYKKGESQTDIEITREEDFTRILQM 270

  Fly   251 ---IVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISA 312
               .::.|.:.:.|.:|.::|.|    :.::.|..:.| :...|.|::     ..||.....|:.
  Rat   271 EEEYIQQLCEDIIQLKPDVVITE----KGISDLAQHYL-MRANVTAIR-----RVRKTDNNRIAR 325

  Fly   313 ATGATIFGDDINYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQI 377
            |.||.|      .|:.||.:.:|:|                  ...||||  |::|.||.     
  Rat   326 ACGARI------VSRPEELREDDVG------------------TGAGLLE--IKKIGDEY----- 359

  Fly   378 KPEQRDRLRQRLSALT-----KGVAVLHIGGGSEVEVNEKKDRVVDALNATR-AAIEEGIVPGGG 436
                       .:.:|     |...:|..|...|: ::|.:..:.||:...| ..::..:|||||
  Rat   360 -----------FTFITDCKDPKACTILLRGASKEI-LSEVERNLQDAMQVCRNVLLDPQLVPGGG 412

  Fly   437 TAFLRCIPYLQELKTESADLQKGVD-----IVCNALRMPCQTIAQNAGVDGPMVVAKV-----LN 491
            .:.:.....|    ||.:....||:     .|..||.:..:|:.||.|.....::..:     ..
  Rat   413 ASEMAVAHAL----TEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQE 473

  Fly   492 GSEDYGYDAMGDEYCRLVEKGIIDPTKV-LRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSG 555
            ..|.:|.:........:.|.||.:|..| |:|..|.......||...::|....:..|..::.:|
  Rat   474 NCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQTG 538

  Fly   556 A 556
            |
  Rat   539 A 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 121/586 (21%)
GroEL 22..543 CDD:239460 118/571 (21%)
Cct3NP_954522.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 2/4 (50%)
chap_CCT_gamma 6..529 CDD:274085 118/574 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..545 3/14 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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