DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60B and Cct5

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001004078.1 Gene:Cct5 / 294864 RGDID:735161 Length:541 Species:Rattus norvegicus


Alignment Length:517 Identity:107/517 - (20%)
Similarity:198/517 - (38%) Gaps:121/517 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RAMMIRGVDIL------ADAVAVTM----GPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHM 85
            |...:.|::.|      |.|||.||    ||.|...::........:|.||.|:   :::.|...
  Rat    24 RKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATI---LSMMDVDH 85

  Fly    86 NLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLK 150
            .: |||:.:::.:.::..|||||...|||.|:.:|....:..|.:|:.|..|...|..:....|.
  Rat    86 QI-AKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLD 149

  Fly   151 EMSKAVETREEIQQVATLSANGDTEIGRLIGEATDK----VGPRGTITVKDGKRLKDELNIIQGL 211
            ::|..|..  :|.....|.....|.:|..:..:..:    :.....:||.|.:|...:..:|:  
  Rat   150 KISDNVLV--DINNPEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIK-- 210

  Fly   212 RFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRPLIIIAEDISGEA 276
                       |....|.::|.               ::::||           :|:.:|.|...
  Rat   211 -----------VEGKVGGRLED---------------TKLIKG-----------VIVDKDFSHPQ 238

  Fly   277 LNALVLNKLRLGLQVCAVKSP--------------------SYGHHR-KELIGDISAATGATI-- 318
            :...||| .::.:..|..:.|                    .|...: :|:|..|. .|||.:  
  Rat   239 MPKEVLN-AKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIAQIK-ETGANLAI 301

  Fly   319 ----FGDDINYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDE-------- 371
                |.|:.|:..::.. |..:..||...|  :...:..|    |.:..|..::..|        
  Rat   302 CQWGFDDEANHLLLQNG-LPAVRWVGGPEI--ELIAIATG----GRIVPRFSELTSEKLGFAGVV 359

  Fly   372 -------LAEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEE 429
                   ..:|.:..||....|    |:|     :.|.||:::.:.|.|..:.|||...|..|.:
  Rat   360 REISFGTTKDKMLVIEQCKNSR----AVT-----IFIRGGNKMIIEEAKRSLHDALCVIRNLIRD 415

  Fly   430 G-IVPGGGTAFLRCIPYLQELKTESADL-QKGVDIVCNALRMPCQTIAQNAGVDGPMVVAKV 489
            . :|.|||.|.:.|...:.:...:...| |..:....:||.:....:::|:|::....:.:|
  Rat   416 NRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEV 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 107/517 (21%)
GroEL 22..543 CDD:239460 107/517 (21%)
Cct5NP_001004078.1 TCP1_epsilon 10..535 CDD:239455 107/517 (21%)
Cpn60_TCP1 44..533 CDD:278544 102/497 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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