DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60B and hspd1

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_851847.1 Gene:hspd1 / 282676 ZFINID:ZDB-GENE-021206-1 Length:575 Species:Danio rerio


Alignment Length:579 Identity:331/579 - (57%)
Similarity:437/579 - (75%) Gaps:28/579 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RMYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKD 82
            |.|:|||:||:..||:|::|||:||||||||||||||:||:|:.|.|||:||||.|||:||.|||
Zfish    24 RAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKD 88

  Fly    83 QHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKD 147
            ::.|:|||||||||:||||.||||||||||||||:|||||:.|:.||||||||||||:||:.|..
Zfish    89 RYKNIGAKLVQDVANNTNEEAGDGTTTATVLARAVAKEGFDTISKGANPVEIRRGVMMAVEEVIS 153

  Fly   148 KLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKDGKRLKDELNIIQGLR 212
            :||:.||.|.|.|||.||||:|||||||:|.:|..|..|||.:|.|||||||.|.|||.||:|::
Zfish   154 ELKKNSKPVTTPEEIAQVATISANGDTEVGNIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMK 218

  Fly   213 FDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRPLIIIAEDISGEAL 277
            ||.||:||:|:|::||.|.||.:|.|::|.|||:.:..||..||.:.:.|:||:|:|||:.||||
Zfish   219 FDRGYISPYFINTAKGQKCEFQDAYVLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEAL 283

  Fly   278 NALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEAKLEDLGQVGEA 342
            :.||||:|::||||.|||:|.:|.:||..:.|::.:||.|:|||:.....:|:.:..|.|:|||.
Zfish   284 STLVLNRLKVGLQVVAVKAPGFGDNRKNQLQDMAVSTGGTVFGDEAMGLALEDIQAHDFGKVGEV 348

  Fly   343 VISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEV 407
            :::||.||||:|:.....:|.|:.:|.::| |......::::|.:||:.|:.||||:.:||.|:|
Zfish   349 IVTKDDTMLLKGRGDASAIEKRVNEIAEQL-ESTNSDYEKEKLNERLAKLSDGVAVIKVGGTSDV 412

  Fly   408 EVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELKTESADLQKGVDIVCNALRMPCQ 472
            |||||||||.|||||||||:|||||||||.|.|||||.|..:|..:||.:.|:||:..:||:|..
Zfish   413 EVNEKKDRVTDALNATRAAVEEGIVPGGGCALLRCIPALDNIKPANADQKIGIDIIRRSLRIPAM 477

  Fly   473 TIAQNAGVDGPMVVAKVLNGSEDYGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLSTT 537
            |||:||||:|.:||.|:|..|.:.|||||..||..:||:||||||||:|||:.|||||||||||.
Zfish   478 TIAKNAGVEGSLVVEKILQSSTEIGYDAMNGEYVNMVERGIIDPTKVVRTALLDAAGVASLLSTA 542

  Fly   538 EVVITDSRNDDLLSKLSGAGGGMDDGLDMNMGGLEELAALSGLGGMGGMGGMGGMGGMG 596
            |.|:|:...::                       :|:.|    ||||||||||||||||
Zfish   543 EAVVTEIPKEE-----------------------KEMPA----GGMGGMGGMGGMGGMG 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 313/539 (58%)
GroEL 22..543 CDD:239460 310/520 (60%)
hspd1NP_851847.1 PTZ00114 24..558 CDD:185455 314/557 (56%)
GroEL 28..548 CDD:239460 310/520 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581495
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61846
OrthoDB 1 1.010 - - D183447at33208
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.720

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