DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and cct3

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_775357.1 Gene:cct3 / 192327 ZFINID:ZDB-GENE-020419-5 Length:543 Species:Danio rerio


Alignment Length:600 Identity:127/600 - (21%)
Similarity:231/600 - (38%) Gaps:131/600 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SKDVRFGSGVRAMM--IRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQ 83
            |::::..||.:..:  |.....:||.:...:||:....::..|.....:|.||..:.|.|.:  |
Zfish    10 SQNIKRESGRKVQIGNISAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQV--Q 72

  Fly    84 HMNLGAKLVQDVADNTNESAGDGTTTATVLA---RAIAKEGFNQ-----ITMGA------NPVEI 134
            |.  .||.:.:::...:|..|||||:..:||   .::|::...|     :.:||      :.:.|
Zfish    73 HP--AAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVVIGAYRQALDDMLNI 135

  Fly   135 RRGVMLAVDVV-KD-KLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKD 197
            .:.:...|||. :| .||.::.|:.|: .:.:.:||:.|...:..|.:  ..|:.| |..|.:|.
Zfish   136 LKDISTPVDVSNRDMMLKIINSAINTK-ALSRWSTLACNIALDAVRTV--ELDENG-REEIDIKK 196

  Fly   198 GKRLK-------DELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQ----- 250
            ..:::       ::..:::|:..:.....|......|..::    .|:..||:...|.||     
Zfish   197 YAKVEKVPGGIIEDSCVLRGVMVNKDVTHPRMRRLIKNPRI----VLLDCSLEYKKGESQTDIEI 257

  Fly   251 ----------------IVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSY 299
                            :.:..|..:|.:..||...:.||..|.:.|      :...:.|::    
Zfish   258 AREEDFARILQMEEEYVQQICEDIIRLKPDLIFTEKGISDLAQHYL------MKANITAIR---- 312

  Fly   300 GHHRKELIGDISAATGATIFGDDINYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMR 364
             ..||.....|:.|.||.|      .|:.:|....|:|                  ..|||.|  
Zfish   313 -RIRKTDNNRIARACGARI------ASRTDELTENDVG------------------TGTGLFE-- 350

  Fly   365 IQQIQDELAEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATR-AAIE 428
            :::|.||..  ....|.:|         .|...:|..|...|: :.|.:..:.||:...| ..::
Zfish   351 VKKIGDEYF--TFVTECKD---------PKACTILLRGASKEI-LAEVERNLQDAMQVCRNVLLD 403

  Fly   429 EGIVPGGGTAFLRCIPYLQELKTESADLQKGVD-----IVCNALRMPCQTIAQNAGVDGPMVVAK 488
            ..::||||...:.    :....||.:....||:     .|..||.:..:|:.||.|.....|:..
Zfish   404 PYLLPGGGAVEME----VSHRLTERSRAMTGVEQWPYRAVAQALEVVPRTLIQNCGASAIRVLTS 464

  Fly   489 V-----LNGSEDYGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLSTTEVVITDSRNDD 548
            :     ..|:..:|.:........:.:.||.:|..|.......|...|.||         .|.||
Zfish   465 LRAKHTQEGNSSWGVNGETGTLADMEQLGIWEPLAVKAQTYKTAVETAILL---------LRIDD 520

  Fly   549 LLSKLSGAGGGMDDG 563
            ::|.....|.|...|
Zfish   521 IVSGHKKKGDGEQTG 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 124/593 (21%)
GroEL 22..543 CDD:239460 119/577 (21%)
cct3NP_775357.1 chap_CCT_gamma 5..528 CDD:274085 124/591 (21%)
TCP1_gamma 5..524 CDD:239453 123/587 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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