DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60B and hsp-60

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_497429.1 Gene:hsp-60 / 175316 WormBaseID:WBGene00002025 Length:568 Species:Caenorhabditis elegans


Alignment Length:580 Identity:327/580 - (56%)
Similarity:417/580 - (71%) Gaps:28/580 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RMYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKD 82
            |.|:|||:||:..|..|:.||::|||||:||||||||:||:|:.|.||||||||.|||:||.|||
 Worm    15 RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKD 79

  Fly    83 QHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKD 147
            ::.||||||:||||:..||.||||||.|||||||||||||..|..|.|.||||||||.||:||..
 Worm    80 KYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVEVVVA 144

  Fly   148 KLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKDGKRLKDELNIIQGLR 212
            :||::||.|.|.|||.||||:||||||.:|.||.:|..|||..|.|||||||.|.|||.:|:|::
 Worm   145 ELKKISKKVTTPEEIAQVATISANGDTVVGNLISDAMKKVGTTGVITVKDGKTLNDELELIEGMK 209

  Fly   213 FDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRPLIIIAEDISGEAL 277
            ||.||:||:|:.|:||:|||:..|||::|.|||:.:..||..||.:.:.||||:|||||:.||||
 Worm   210 FDRGYISPYFITSAKGAKVEYEKALVLLSEKKISQVQDIVPALELANKLRRPLVIIAEDVDGEAL 274

  Fly   278 NALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEAKLEDLGQVGEA 342
            ..||||:|::||||.|:|:|.:|.:||..:.|:..||||||||||.|..|:|:....|||:|.|.
 Worm   275 TTLVLNRLKVGLQVVAIKAPGFGDNRKNTLKDMGIATGATIFGDDSNLIKIEDITANDLGEVDEV 339

  Fly   343 VISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEV 407
            .|:||.|:||:|:.....:|.||:.|.||: |:.....::::|.:||:.|:||||||.|||||||
 Worm   340 TITKDDTLLLRGRGDQTEIEKRIEHITDEI-EQSTSDYEKEKLNERLAKLSKGVAVLKIGGGSEV 403

  Fly   408 EVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELKTESADLQKGVDIVCNALRMPCQ 472
            ||.||||||.|||.|||||:|||||||||.|.||.:..|:..|..:.|.|.||:||..||..|..
 Worm   404 EVGEKKDRVTDALCATRAAVEEGIVPGGGVALLRSLTALKNYKAANEDQQIGVNIVKKALTQPIA 468

  Fly   473 TIAQNAGVDGPMVVAKVL-NGSEDYGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLST 536
            ||.:|||::...::.:|. |.:..|||||:..::..:.|.||||||||:|||:.||:||||||:|
 Worm   469 TIVKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQDASGVASLLAT 533

  Fly   537 TEVVITDSRNDDLLSKLSGAGGGMDDGLDMNMGGLEELAALSGLGGMGGMGGMGGMGGMG 596
            ||.|:|:      :.|....||                    ..||||||||||||||||
 Worm   534 TECVVTE------IPKEEAVGG--------------------PAGGMGGMGGMGGMGGMG 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 309/540 (57%)
GroEL 22..543 CDD:239460 305/521 (59%)
hsp-60NP_497429.1 PTZ00114 14..546 CDD:185455 309/537 (58%)
GroEL 19..540 CDD:239460 305/521 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159662
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61846
OrthoDB 1 1.010 - - D183447at33208
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.860

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