DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and Hspd1

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001343441.1 Gene:Hspd1 / 15510 MGIID:96242 Length:573 Species:Mus musculus


Alignment Length:593 Identity:331/593 - (55%)
Similarity:432/593 - (72%) Gaps:40/593 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SRCFA----RMYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFT 73
            ||..|    |.|:|||:||:..||:|::|||:||||||||||||||:||:|:.|.|||:||||.|
Mouse    15 SRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVT 79

  Fly    74 VARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGV 138
            ||:||.|||::.|:|||||||||:||||.|||||||||||||:||||||.:|:.|||||||||||
Mouse    80 VAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGV 144

  Fly   139 MLAVDVVKDKLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKDGKRLKD 203
            |||||.|..:||:.||.|.|.|||.||||:|||||.:||.:|.:|..|||.:|.|||||||.|.|
Mouse   145 MLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKDIGNIISDAMKKVGRKGVITVKDGKTLND 209

  Fly   204 ELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRPLIII 268
            ||.||:|::||.||:||:|:|:|||.|.||.:|.|::|.|||:.:..||..||.:...|:||:||
Mouse   210 ELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSVQSIVPALEIANAHRKPLVII 274

  Fly   269 AEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEAKL 333
            |||:.||||:.||||:|::||||.|||:|.:|.:||..:.|::.|||..:||::.....:|:.:.
Mouse   275 AEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAVFGEEGLNLNLEDVQA 339

  Fly   334 EDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALTKGVAV 398
            .|||:|||.:::||..|||:||.....:|.|||:|.::| :......::::|.:||:.|:.||||
Mouse   340 HDLGKVGEVIVTKDDAMLLKGKGDKAHIEKRIQEITEQL-DITTSEYEKEKLNERLAKLSDGVAV 403

  Fly   399 LHIGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELKTESADLQKGVDIV 463
            |.:||.|:||||||||||.|||||||||:|||||.|||.|.|||||.|..||..:.|.:.|::|:
Mouse   404 LKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEII 468

  Fly   464 CNALRMPCQTIAQNAGVDGPMVVAKVLNGSEDYGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAA 528
            ..||::|..|||:||||:|.::|.|:|..|.:.|||||..::..:|||||||||||:|||:.|||
Mouse   469 KRALKIPAMTIAKNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAA 533

  Fly   529 GVASLLSTTEVVITDSRNDDLLSKLSGAGGGMDDGLDMNMGGLEELAALSGLGGMGGMGGMGGMG 593
            ||||||:|.|.|:|:...::           .|.                      |||.|||||
Mouse   534 GVASLLTTAEAVVTEIPKEE-----------KDP----------------------GMGAMGGMG 565

  Fly   594 GMGGMGGG 601
              ||||||
Mouse   566 --GGMGGG 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 316/548 (58%)
GroEL 22..543 CDD:239460 310/520 (60%)
Hspd1NP_001343441.1 GroEL 28..548 CDD:239460 310/520 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837752
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61846
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1504
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.710

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