DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and Cct3

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_033966.1 Gene:Cct3 / 12462 MGIID:104708 Length:545 Species:Mus musculus


Alignment Length:586 Identity:121/586 - (20%)
Similarity:224/586 - (38%) Gaps:121/586 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKL 91
            |..|::..|.....:||.:...:|||....::..|.....:|.||..:.|.|.:  ||.  .||.
Mouse    19 GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQV--QHP--AAKS 79

  Fly    92 VQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAV 156
            :.:::...:|..|||||:..:||..:.....:.:....:|..:.....:|:|.:...||::|..|
Mouse    80 MIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMISTLKKISTPV 144

  Fly   157 ETREEIQQVATLSANGDTEI-----GRLIGEATDKV-------GPRGTITVKDGKRLK------- 202
            :.......::.::::..|::     ......|.|.|       ..|..|.:|...|::       
Mouse   145 DVNNREMMLSIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGII 209

  Fly   203 DELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQ----------------- 250
            ::..:::|:..:.....|......|..::    .|:..||:...|.||                 
Mouse   210 EDSCVLRGVMINKDVTHPRMRRYIKNPRI----VLLDSSLEYKKGESQTDIEITREEDFTRILQM 270

  Fly   251 ---IVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISA 312
               .:..|.:.:.|.:|.::|.|    :.::.|..:.| :...|.|::     ..||.....|:.
Mouse   271 EEEYIHQLCEDIIQLKPDVVITE----KGISDLAQHYL-MRANVTAIR-----RVRKTDNNRIAR 325

  Fly   313 ATGATIFGDDINYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQI 377
            |.||.|      .|:.||.:.:|:|                  ...||||  |::|.||.     
Mouse   326 ACGARI------VSRPEELREDDVG------------------TGAGLLE--IKKIGDEY----- 359

  Fly   378 KPEQRDRLRQRLSALT-----KGVAVLHIGGGSEVEVNEKKDRVVDALNATR-AAIEEGIVPGGG 436
                       .:.:|     |...:|..|...|: ::|.:..:.||:...| ..::..:|||||
Mouse   360 -----------FTFITDCKDPKACTILLRGASKEI-LSEVERNLQDAMQVCRNVLLDPQLVPGGG 412

  Fly   437 TAFLRCIPYLQELKTESADLQKGVD-----IVCNALRMPCQTIAQNAGVDGPMVVAKV-----LN 491
            .:.:.....|    ||.:....||:     .|..||.:..:|:.||.|.....::..:     ..
Mouse   413 ASEMAVAHAL----TEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQE 473

  Fly   492 GSEDYGYDAMGDEYCRLVEKGIIDPTKV-LRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSG 555
            ..|.:|.:........:.|.||.:|..| |:|..|.......||...::|....:..|..::.:|
Mouse   474 SCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQTG 538

  Fly   556 A 556
            |
Mouse   539 A 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 121/586 (21%)
GroEL 22..543 CDD:239460 118/571 (21%)
Cct3NP_033966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 2/4 (50%)
chap_CCT_gamma 6..529 CDD:274085 118/574 (21%)
TCP1_gamma 6..525 CDD:239453 118/570 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..545 3/14 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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