DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and Cct2

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001345696.1 Gene:Cct2 / 12461 MGIID:107186 Length:535 Species:Mus musculus


Alignment Length:576 Identity:128/576 - (22%)
Similarity:214/576 - (37%) Gaps:156/576 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GVDILADAVAVTMGPKGRSVIVERPWTSPK-----ITKDGFTVARSIALKDQHMNLGAKLVQDVA 96
            |...:.|.|..|:||||...|:   .:|.:     :|.||.|:.::|.:.    |..||::.|::
Mouse    31 GAIAIGDLVKSTLGPKGMDKIL---LSSGRDAALMVTNDGATILKNIGVD----NPAAKVLVDMS 88

  Fly    97 DNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAVE---- 157
            ...::..|||||:.||||..:.:|..:.|....:|..|..|...|....::.|  :|.||:    
Mouse    89 RVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIISGWREATKAAREAL--LSSAVDHGSD 151

  Fly   158 ----------------------------TREEIQQVATLSANGDTE----IGRLIGEATDKVGPR 190
                                        |:..::.|..|..:|:.|    |.:|.|...|.....
Mouse   152 EARFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDE 216

  Fly   191 G-----TITVKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQ 250
            |     .|.|...||:::...:|.....|...:..|      ||:|.      :.|..|:   ::
Mouse   217 GFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIF------GSRVR------VDSTAKV---AE 266

  Fly   251 IVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQ--------VCAVKSPSY-GHHRKEL 306
            |....::.::::      .|.|....:|..:..:|.....        |.|::...: |..|..|
Mouse   267 IEHAEKEKMKEK------VERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLAL 325

  Fly   307 I--GDISAATGATIFGDDINYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQ 369
            :  |:|     |:.| |.....|:...||.:...:||..:...|.:.| |:..|.:|....|||.
Mouse   326 VTGGEI-----ASTF-DHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL-GEACTIVLRGATQQIL 383

  Fly   370 DELAEKQIKPEQRDRLRQRLSALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEE-GIVP 433
            || ||:.                      ||                 |||......::: ..|.
Mouse   384 DE-AERS----------------------LH-----------------DALCVLAQTVKDPRTVY 408

  Fly   434 GGGTAFLRCIPYLQELKTESADLQKGVDIV-----CNALRMPCQTIAQNAGVDGPMVVAKV---- 489
            |||.:.:    .:....|:.|:...|.:.|     ..||||....||.|||.|...:||::    
Mouse   409 GGGCSEM----LMAHAVTQLANRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAH 469

  Fly   490 ----LNGSEDYGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLSTTEVVI 541
                :....|.....:||    :...||.:..:|.|..:..||..|.::...:.:|
Mouse   470 SEGHITAGLDMKEGTIGD----MAVLGITESFQVKRQVLLSAAEAAEVILRVDNII 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 128/576 (22%)
GroEL 22..543 CDD:239460 128/576 (22%)
Cct2NP_001345696.1 TCP1_beta 11..527 CDD:239452 128/576 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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