DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60B and CCT4

DIOPT Version :9

Sequence 1:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_006421.2 Gene:CCT4 / 10575 HGNCID:1617 Length:539 Species:Homo sapiens


Alignment Length:557 Identity:118/557 - (21%)
Similarity:236/557 - (42%) Gaps:95/557 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKLVQD 94
            :|...|.....:|||:..::||||...:::.......||.||.|:.:.:    |.::..|:::.:
Human    33 IRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQM----QVLHPAARMLVE 93

  Fly    95 VADNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAVE-- 157
            ::...:..||||||:..::|.::.......:..|.:|..|......|::...:.|.:||:.||  
Human    94 LSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELS 158

  Fly   158 TREEIQQVATLSANGDTEIGRLIGEATDKVGPRG--------------TITVKDGKRLK------ 202
            .||.:...||.|.|     .:::.:.:..:.|..              ::.::|.|.:|      
Human   159 DRETLLNSATTSLN-----SKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTI 218

  Fly   203 DELNIIQGL----RFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKG----LEQSL 259
            |:..:::||    :..|..::.  |..:|...::|.     :|..|....:|||..    :::.|
Human   219 DDCELVEGLVLTQKVSNSGITR--VEKAKIGLIQFC-----LSAPKTDMDNQIVVSDYAQMDRVL 276

  Fly   260 RQRRPLII-IAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDI 323
            |:.|..|: :.:.|.....|.|::.|..|                ::.:.|:     |..|.:.:
Human   277 REERAYILNLVKQIKKTGCNVLLIQKSIL----------------RDALSDL-----ALHFLNKM 320

  Fly   324 NYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQI-QDELAEKQIKPEQRDRLRQ 387
            ....:::.:.||:    |.:.....|     ||...:.:.....: ..|||| ::......:|.:
Human   321 KIMVIKDIEREDI----EFICKTIGT-----KPVAHIDQFTADMLGSAELAE-EVNLNGSGKLLK 375

  Fly   388 RLSALTKGVAVLHIGGGSEVEVNEKKDRVV-DALNATRAAIEE-GIVPGGGTAFLRCIPYLQELK 450
            .....:.|..|..:..||...|.|:.:|.: |||...|..::: .::.|||...:.....|    
Human   376 ITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRL---- 436

  Fly   451 TESADLQKGVDIVC-----NALRMPCQTIAQNAGVDGPMVVAKVLN----GSEDYGYDAMGDEYC 506
            ||.:....|::..|     :|:.:...|:|:|||::....|.::.|    |.:..|.:.......
Human   437 TEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGIS 501

  Fly   507 RLVEKGIIDPTKVLRTAITDAA-GVASLLSTTEVVIT 542
            .::|:.::.|..|..:|:|.|. .|.|:|...:||.|
Human   502 NILEELVVQPLLVSVSALTLATETVRSILKIDDVVNT 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 118/557 (21%)
GroEL 22..543 CDD:239460 118/557 (21%)
CCT4NP_006421.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
TCP1_delta 25..538 CDD:239454 117/555 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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