Sequence 1: | NP_001247399.1 | Gene: | heph / 48571 | FlyBaseID: | FBgn0011224 | Length: | 898 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_015437.1 | Gene: | MRD1 / 856228 | SGDID: | S000006316 | Length: | 887 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 663 | Identity: | 137/663 - (20%) |
---|---|---|---|
Similarity: | 231/663 - (34%) | Gaps: | 210/663 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 307 KKVRIDEQYIYKLNYLRGSDELLSQAAVMAPASD---NNNQDLATKKAKLEPGTV-------LAG 361
Fly 362 GIAKASKV--IHLRNIPNESGEADVIALGIPFGRVTNVLVL------KGKNQAFIEMADEISATS 418
Fly 419 MVSCYTVTPPQM-RGRMVYV----QFSNHR---------------ELKTDQGHNNSTA--HSDYS 461
Fly 462 VQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGN------------TNAAGG 514
Fly 515 PNTVLR----VIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 575
Fly 576 LDGQNIYNG----------CCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGG 630
Fly 631 LMNTNDLLLIAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNAL-------PNLAAFSLAN 688
Fly 689 SGALQTTAPAMRGYSNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDS--------AL 745
Fly 746 IQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGS 810
Fly 811 KNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSF----EVKAFKFFPKD-RKMALLQLLSVEE 870
Fly 871 AVLALIKMHNHQL 883 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
heph | NP_001247399.1 | hnRNP-L_PTB | 366..898 | CDD:273733 | 120/594 (20%) |
RRM1_PTBP1_like | 368..448 | CDD:241132 | 27/107 (25%) | ||
RRM2_PTBP1_like | 516..611 | CDD:241137 | 21/108 (19%) | ||
RRM3_PTBP1_like | 705..778 | CDD:240869 | 16/80 (20%) | ||
RRM4_PTBP1_like | 822..897 | CDD:240871 | 20/67 (30%) | ||
MRD1 | NP_015437.1 | RRM4_MRD1 | 663..746 | CDD:409758 | 18/104 (17%) |
RRM5_MRD1 | 763..837 | CDD:241014 | 21/80 (26%) | ||
RRM1_RBM19_MRD1 | 2..92 | CDD:409754 | |||
RRM | 222..612 | CDD:223796 | 75/349 (21%) | ||
RRM2_MRD1 | 343..421 | CDD:409982 | 22/80 (28%) | ||
RRM3_MRD1 | 532..603 | CDD:241012 | 14/72 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |