DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and MSL1

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_012274.1 Gene:MSL1 / 854826 SGDID:S000001448 Length:111 Species:Saccharomyces cerevisiae


Alignment Length:94 Identity:33/94 - (35%)
Similarity:47/94 - (50%) Gaps:4/94 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   694 TTAPAMRGYSNVLLVSNLNEEMVTPDA---LFTLFGVYGDVQRVKILYNK-KDSALIQMAEPQQA 754
            |.|..:....|.|.||.|||::.....   ||.||..:|:|.:|.:.:.| :..|.|.|....||
Yeast    18 TVAEPVTEAKNTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQA 82

  Fly   755 YLAMSHLDKLRLWGKPIRVMASKHQAVQL 783
            .||...|:..|.:|||::|..||.:...|
Yeast    83 SLAQISLNGERFFGKPLKVEFSKSETKTL 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 33/94 (35%)
MSL1NP_012274.1 RRM1_U1A_like 29..105 CDD:409692 27/75 (36%)

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