DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and PTB3

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_175010.2 Gene:PTB3 / 840918 AraportID:AT1G43190 Length:432 Species:Arabidopsis thaliana


Alignment Length:535 Identity:176/535 - (32%)
Similarity:258/535 - (48%) Gaps:109/535 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 IAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTP 427
            :|::|||:|:||:.:|..|.|::.|..|||.:|.:::|:.||||.::|.|..||.|.:..:|...
plant     1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQFFTNVQ 65

  Fly   428 PQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNS 492
            |.:|||.||||||:|:||.|                                ...|.:...|.  
plant    66 PTIRGRNVYVQFSSHQELTT--------------------------------IEQNIHGREDE-- 96

  Fly   493 AMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSF 557
                                  ||.:|.|.:..::||:::|:|||:|..||.|.|:|||.|:..|
plant    97 ----------------------PNRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGF 139

  Fly   558 QALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGV 622
            ||||||.....|..|::.|.|:|||:|||.|.|..|.|..|.|.||||:|||:|||.||..:.|.
plant   140 QALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGR 204

  Fly   623 DIMPTAGGLMNTNDLLLIAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLA 687
            ...|.                         .|..||..|               .:.|.:|.:.|
plant   205 SSHPC-------------------------YGDTGVAYP---------------QMANTSAIAAA 229

  Fly   688 NSGALQTTAPAMRGYSN--VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAE 750
            ..|.|   .|.:.|.::  .:||||||.:.:..|.||.||.:||::.|:|:|.||.|.||:||.:
plant   230 FGGGL---PPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGD 291

  Fly   751 PQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQN 815
            ..||.||:..|....|:||.:.|..|||..:....:       :.||..:.|:||.:..:|||:.
plant   292 GFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTD-------SHDYVNSNLNRFNRNAAKNYRY 349

  Fly   816 IYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHN 880
            ...|:..:|||.:|...:|:::......:...|....|....:|.||:|..:.|||..||:..|.
plant   350 CCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEEAAEALVCKHA 414

  Fly   881 HQLSESNHLRVSFSK 895
            ..|..| .:|:|||:
plant   415 TSLGGS-IIRISFSQ 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 175/532 (33%)
PTB3NP_175010.2 hnRNP-L_PTB 5..427 CDD:273733 173/528 (33%)

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