Sequence 1: | NP_001247399.1 | Gene: | heph / 48571 | FlyBaseID: | FBgn0011224 | Length: | 898 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_200130.1 | Gene: | PTB2 / 835399 | AraportID: | AT5G53180 | Length: | 429 | Species: | Arabidopsis thaliana |
Alignment Length: | 519 | Identity: | 141/519 - (27%) |
---|---|---|---|
Similarity: | 199/519 - (38%) | Gaps: | 186/519 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 367 SKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKG--KNQAFIEMADEISATSMVSCYTVT--P 427
Fly 428 PQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNS 492
Fly 493 AMGILQNTSAVNAGGNTNAAGGPNTVLRVIVE---SLMYPVSLDILHQIFQRYGKVLKIVTFTKN 554
Fly 555 NSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLRIDNSKLTALNVKYNNDKSRDFTN 612
Fly 613 PALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNA 677
Fly 678 LPNLAAFSLANSGALQTTAPAMRGYSNVLLVSNLN-EEMVTPDALFTLFGVYGDVQRVKILYNKK 741
Fly 742 D--SALIQMAEPQQAYLAMSHL-----------------------------DKLRLWGKPIRVMA 775
Fly 776 SKHQAVQLPKEGQPD-----AGLTRDYSQNPLHRFKKPGSK----------NYQNIYPPSATLH 824 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
heph | NP_001247399.1 | hnRNP-L_PTB | 366..898 | CDD:273733 | 141/519 (27%) |
RRM1_PTBP1_like | 368..448 | CDD:241132 | 39/83 (47%) | ||
RRM2_PTBP1_like | 516..611 | CDD:241137 | 43/104 (41%) | ||
RRM3_PTBP1_like | 705..778 | CDD:240869 | 25/104 (24%) | ||
RRM4_PTBP1_like | 822..897 | CDD:240871 | 1/3 (33%) | ||
PTB2 | NP_200130.1 | RRM1_PTBPH1_PTBPH2 | 16..96 | CDD:241130 | 38/78 (49%) |
RRM2_PTBPH1_PTBPH2 | 110..204 | CDD:241135 | 41/104 (39%) | ||
RRM3_PTBPH1_PTBPH2 | 243..339 | CDD:241134 | 26/96 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1190 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1545178at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR15592 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.880 |