DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and ptbp2

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001072479.1 Gene:ptbp2 / 779934 XenbaseID:XB-GENE-491012 Length:531 Species:Xenopus tropicalis


Alignment Length:587 Identity:300/587 - (51%)
Similarity:387/587 - (65%) Gaps:80/587 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 RGSDELLSQAAVMAPASD--------NNNQDLATK-KAKLEPGTVLAGGIAKASKVIHLRNIPNE 378
            ||||||||.:.:..|:|:        |.|.:...| ..|:|         |..|:|:|:|.:|.|
 Frog    14 RGSDELLSGSVLNGPSSNMSSVVVTANGNDNKKFKGDDKME---------AAPSRVLHIRKLPGE 69

  Fly   379 SGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHR 443
            ..|.:|||||:|||:|||:|:||||||||:|:|.|.:|::||:.||...|.:|.:.:|:|:|||:
 Frog    70 VTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPHLRNQPIYIQYSNHK 134

  Fly   444 ELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGN 508
            |||||...|.             ....:..:..|..|||::.:|:.:|      :||        
 Frog   135 ELKTDSALNQ-------------RAQAVLQAVTAVQTSNSSVTSTAAN------ENT-------- 172

  Fly   509 TNAAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAK 573
            .::|..|  |||:|::::.|||:||:|||||.::|.||||:||||||.||||:||.|..:||.||
 Frog   173 VSSAQSP--VLRIIIDNMYYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAK 235

  Fly   574 SLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP--PGEPGVDIMPTAGGLMNTND 636
            ..||||||||.|||||||.|||..||||||||||||:|.|.||  .|:|.:|  |.         
 Frog   236 LALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALD--PA--------- 289

  Fly   637 LLLIAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMRG 701
               |||......|:  |..||.|.|    ||          :||.||.:.|.:.:.........|
 Frog   290 ---IAAAFAKETSL--LAVPGALSP----LG----------IPNAAAAAAAAAASRVGMHGVSTG 335

  Fly   702 YSNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRL 766
            .:.||||||||||||:|.:|||||||||||||||||||||||||||||:..|:.||||||:..::
 Frog   336 GNTVLLVSNLNEEMVSPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKM 400

  Fly   767 WGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSS 831
            :||.|||..||||.||||:||..|.|||:|:|.:||||||||||||:|||:||||||||||||.:
 Frog   401 YGKIIRVTLSKHQTVQLPREGLDDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQN 465

  Fly   832 CSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKS 896
            .:|||::..||:....||||||| :|.||||||:.:||||:.|||.:||:.:.:::|||||||||
 Frog   466 ITEDDLRTLFTNTGGNVKAFKFF-QDHKMALLQMSTVEEAIQALIDLHNYNIGDNHHLRVSFSKS 529

  Fly   897 NI 898
            .|
 Frog   530 TI 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 283/533 (53%)
ptbp2NP_001072479.1 hnRNP-L_PTB 57..531 CDD:273733 283/533 (53%)

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