DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and hnrnpl2

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001410665.1 Gene:hnrnpl2 / 573096 ZFINID:ZDB-GENE-040426-2707 Length:522 Species:Danio rerio


Alignment Length:604 Identity:157/604 - (25%)
Similarity:249/604 - (41%) Gaps:158/604 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 ATKKAKLEPGTVLAGGIAK----------ASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLK 401
            |||:.|.|.    .||:|.          .|.|:|:|.:.:...|:|::.....||.::.|:::.
Zfish    15 ATKRQKTEN----EGGMATEGYTDPHKTLPSLVVHVRGLVDGVLESDIVEALQEFGTISYVVLMP 75

  Fly   402 GKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPA 466
            .|.||.:|..|                 |.|....|.::|..::.. .||   .|..:||     
Zfish    76 KKRQALVEYED-----------------MNGSCNAVTYANDNQIYI-AGH---PAFVNYS----- 114

  Fly   467 SGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVS 531
                         ||...:...|.:.|..:                   |.||.:.:.:.:||::
Zfish   115 -------------TSQKISRPGDPDDARSV-------------------NNVLLLTIMNPIYPIT 147

  Fly   532 LDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLT 596
            .|:|:.|....|.|.:||.|.| |..||::::....|||.||:.|:|.:||:|||||:|:.:|.|
Zfish   148 SDVLYTICNNCGPVQRIVIFRK-NGVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPT 211

  Fly   597 ALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRPSLSVNGLGAPGVLPP 661
            .|||..|:..:.|:|||:|...:            ||.|.    ..|||              .|
Zfish   212 RLNVFKNDQDTWDYTNPSLGTQD------------MNANP----NKRQR--------------QP 246

  Fly   662 FALGLGTPLTGGYNNALPNLAAFSLANSGALQ---TTAPAMRGYSN------------------- 704
            ..||...|..|||    |.....|....|...   .:||...|.|.                   
Zfish   247 ALLGDHPPEYGGY----PGYPDESYGYEGRRMGPPMSAPRRGGASQRYSAQYGGPPPPPPGEYGA 307

  Fly   705 -----VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKL 764
                 |::|..|:...:..|.:|.:|.:||:|:|||.:.:|..:|:::|.:......|:|||:..
Zfish   308 HADSPVIMVYGLDPVKINADRVFNIFCLYGNVERVKFMKSKPGAAMVEMGDCYAVDRAISHLNNN 372

  Fly   765 RLWGKPIRVMASKHQAVQLPKEGQPDAGLT--RDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSN 827
            .|:.:.:.:..||.||:...:..:.|.|..  :||..:..:||..|.......|..||..||..|
Zfish   373 FLFNQKLNLCVSKQQAIMPGQSYELDDGTNSFKDYHGSRNNRFATPEQAAKNRIQHPSNVLHFFN 437

  Fly   828 -IPSS--------CSEDDIKEAFTSNSFEVKAF--KFFPKDRKMA-LLQLLSVEEAVLALIKMHN 880
             :|.:        |.|..:|     |...:|.|  |....||..: ||:..||.:|:.||..:::
Zfish   438 AVPEATPEMFTRLCEEHGVK-----NPSNIKIFVAKGNSPDRSSSGLLEWESVNDAMEALAMINH 497

  Fly   881 HQLSESN-----HLRVSFS 894
            :|:...|     .|::.||
Zfish   498 NQMKNPNGPYPFTLKLCFS 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 149/575 (26%)
hnrnpl2NP_001410665.1 hnRNP-L_PTB 40..520 CDD:273733 149/575 (26%)

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