DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and PTBP1

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001398069.1 Gene:PTBP1 / 5725 HGNCID:9583 Length:559 Species:Homo sapiens


Alignment Length:604 Identity:326/604 - (53%)
Similarity:396/604 - (65%) Gaps:88/604 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 RGSDELLSQAAVMAP-------ASDNNNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESG 380
            ||||||.|......|       ||..|..|  :||.|   |...:.|:  .|:|||:|.:|.:..
Human    16 RGSDELFSTCVTNGPFIMSSNSASAANGND--SKKFK---GDSRSAGV--PSRVIHIRKLPIDVT 73

  Fly   381 EADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHREL 445
            |.:||:||:|||:|||:|:|||||||||||..|.:|.:||:.||...|.:||:.:|:|||||:||
Human    74 EGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKEL 138

  Fly   446 KTDQGHNNSTAHSD-YSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNT 509
            |||...|.:.|.:. .:|.|..||:   |:.||:|                     :||:||   
Human   139 KTDSSPNQARAQAALQAVNSVQSGN---LALAASA---------------------AAVDAG--- 176

  Fly   510 NAAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKS 574
            .|..|.:.|||:|||:|.|||:||:|||||.::|.||||:||||||.||||:||.|..||||||.
Human   177 MAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 241

  Fly   575 LLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLL 639
            .||||||||.|||||||.||||:||||||||||||:|.|.||.|    |..|:.       |..:
Human   242 SLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSG----DSQPSL-------DQTM 295

  Fly   640 IAARQRPSLSVNGLGAPGVL--PPFALGLGTPLTGGYNNALPNLAAFSLAN-SGALQTTA----- 696
            .||          .||||::  .|:| |.|.|.|    .|:|..|..|:.| .|||...|     
Human   296 AAA----------FGAPGIISASPYA-GAGFPPT----FAIPQAAGLSVPNVHGALAPLAIPSAA 345

  Fly   697 -----------PAMRGYSN-VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMA 749
                       |.:.|..| ||||||||.|.|||.:||.||||||||||||||:|||::||:|||
Human   346 AAAAAAGRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMA 410

  Fly   750 EPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQ 814
            :..||.||||||:..:|.|||||:..||||.||||:|||.|.|||:||..:||||||||||||:|
Human   411 DGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQ 475

  Fly   815 NIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMH 879
            ||:||||||||||||.|.||:|:|..|:||...||.||||.|||||||:|:.||||||.|||.:|
Human   476 NIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLH 540

  Fly   880 NHQLSESNHLRVSFSKSNI 898
            ||.|.|::|||||||||.|
Human   541 NHDLGENHHLRVSFSKSTI 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 308/552 (56%)
PTBP1NP_001398069.1 hnRNP-L_PTB 59..559 CDD:273733 308/552 (56%)

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