Sequence 1: | NP_001247399.1 | Gene: | heph / 48571 | FlyBaseID: | FBgn0011224 | Length: | 898 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005259654.1 | Gene: | PTBP1 / 5725 | HGNCID: | 9583 | Length: | 559 | Species: | Homo sapiens |
Alignment Length: | 604 | Identity: | 326/604 - (53%) |
---|---|---|---|
Similarity: | 396/604 - (65%) | Gaps: | 88/604 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 323 RGSDELLSQAAVMAP-------ASDNNNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESG 380
Fly 381 EADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHREL 445
Fly 446 KTDQGHNNSTAHSD-YSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNT 509
Fly 510 NAAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKS 574
Fly 575 LLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLL 639
Fly 640 IAARQRPSLSVNGLGAPGVL--PPFALGLGTPLTGGYNNALPNLAAFSLAN-SGALQTTA----- 696
Fly 697 -----------PAMRGYSN-VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMA 749
Fly 750 EPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQ 814
Fly 815 NIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMH 879
Fly 880 NHQLSESNHLRVSFSKSNI 898 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
heph | NP_001247399.1 | hnRNP-L_PTB | 366..898 | CDD:273733 | 308/552 (56%) |
RRM1_PTBP1_like | 368..448 | CDD:241132 | 46/79 (58%) | ||
RRM2_PTBP1_like | 516..611 | CDD:241137 | 72/94 (77%) | ||
RRM3_PTBP1_like | 705..778 | CDD:240869 | 51/72 (71%) | ||
RRM4_PTBP1_like | 822..897 | CDD:240871 | 52/74 (70%) | ||
PTBP1 | XP_005259654.1 | hnRNP-L_PTB | 59..559 | CDD:273733 | 308/552 (56%) |
RRM1_PTBP1 | 61..141 | CDD:241221 | 46/79 (58%) | ||
RRM2_PTBP1_like | 183..278 | CDD:241137 | 72/94 (77%) | ||
RRM3_PTBP1 | 366..458 | CDD:241139 | 65/91 (71%) | ||
RRM_SF | 479..559 | CDD:302621 | 57/79 (72%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 140 | 1.000 | Domainoid score | I4752 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1190 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H49188 | |
Inparanoid | 1 | 1.050 | 545 | 1.000 | Inparanoid score | I1164 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S2018 |
OMA | 1 | 1.010 | - | - | QHG58575 | |
OrthoDB | 1 | 1.010 | - | - | D1545178at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001151 | |
OrthoInspector | 1 | 1.000 | - | - | otm41607 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101075 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15592 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4107 |
SonicParanoid | 1 | 1.000 | - | - | X703 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.820 |