DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and ptbp2a

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001315358.1 Gene:ptbp2a / 541437 ZFINID:ZDB-GENE-050320-141 Length:512 Species:Danio rerio


Alignment Length:587 Identity:285/587 - (48%)
Similarity:378/587 - (64%) Gaps:98/587 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 RGSDELLSQAAVMAPA------SDNNNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESGE 381
            ||||||||.....:|:      ||..:....:||.::|...    |.|..|:|:|:|.:||:..|
Zfish    13 RGSDELLSGGMYNSPSSGLSSISDTTSNGSDSKKLRVEERV----GDAPPSRVLHIRKLPNDVSE 73

  Fly   382 ADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELK 446
            |::||||:|||:|||:|.||||||||:|::.|.:|.:||:.|:...|.:|...||:|:|||:|||
Zfish    74 AEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTPHVRSVPVYIQYSNHKELK 138

  Fly   447 TDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNA 511
            ||                             |::.:...|:|.|||:.|             :.:
Zfish   139 TD-----------------------------NSSQSGGTSTSGSNSSDG-------------SGS 161

  Fly   512 AGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLL 576
            |..|  |||:|::::.|||:||:|.|||.::|.|:||:||||||.||||:||.|...||.||..|
Zfish   162 ASSP--VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDPACAQQAKVAL 224

  Fly   577 DGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP--PGEPGVDIMPTAGGLMNTNDLLL 639
            |||||||.|||||||.|||..||||||||||||:|.|.||  .|:|.:|:               
Zfish   225 DGQNIYNACCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDV--------------- 274

  Fly   640 IAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMRGYSN 704
            .||..:.|.|:.| ..||.|.|.                 :.||.:.|.:|.:     |:.|:|:
Zfish   275 AAALSKDSSSLLG-KIPGALSPL-----------------SAAAAAAAAAGRV-----ALSGHSS 316

  Fly   705 ---VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRL 766
               ||||||||||||||.:|||||||||||||||||:|||||||||||:..||.||||||:..::
Zfish   317 SGGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKDSALIQMADMNQAQLAMSHLNGQKM 381

  Fly   767 WGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSS 831
            :.|.|||..||||.||||::|..|.|||:|::.:||||||||||||:|||:||||||||||||..
Zfish   382 FSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQD 446

  Fly   832 CSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKS 896
            .:|:|::..|:::...||||||| :|.||||:|:.::|||:..||.:||:.:..::||:||||||
Zfish   447 VTEEDLRVLFSNSGGTVKAFKFF-QDHKMALIQMSTIEEAIQCLIDLHNYNMGNNHHLKVSFSKS 510

  Fly   897 NI 898
            .|
Zfish   511 TI 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 268/536 (50%)
ptbp2aNP_001315358.1 hnRNP-L_PTB 58..512 CDD:273733 268/536 (50%)

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