Protein Alignment heph and rbm20

DIOPT Version :10

• Sequence 1: NP_001247399.1
• Gene: heph / 48571
• FlyBaseID: FBgn0011224
• Length: 898
• Species: Drosophila melanogaster
• Sequence 2: XP_073793599.1
• Gene: rbm20 / 497540
• ZFINID: ZDB-GENE-050208-256
• Length: 1067
• Species: Danio rerio
• Alignment Length: 569
• Identity: 120/569 - (21%)
• Similarity: 192/569 - (33%)
• Gaps: 183/569 - (32%)

  Fly    87 AQQQQQQQQAQVQ-HQQQMQQQFHYQAQAQAQAQ-----AMLQTYMQLQVNSAVGVSTAPATPTK 145
            |..|..|.|||:. |:.::.|..:..|.|....|     ||.|........|::|.|...|.|..
Zfish    59 ASLQLAQLQAQLTLHRLKLAQTTNTAAAATVLNQVLSNVAMSQPLFNHLRGSSMGQSHGGAFPPP 123

  Fly   146 PVAAQIPGAISGPIAG----PVPVSVPTQFFTAPSTPLT-----------IIPA---------AA 186
            |:|...|.|..|.:.|    |.|..:....|:..|...:           ..||         ..
Zfish   124 PIAFPPPNAALGQMVGGGFTPNPTGIRPSTFSGVSIQKSCQHNDFSKKSGTYPADMDRRLQFGYL 188

  Fly   187 VASSAMFATAATPTSAATTPTNNV-----------------------NNTVNLSAVSRTTTTTTK 228
            ..||...........|.|.|.|||                       :|..:|.::|.:.:....
Zfish   189 GGSSNKVCDGGQYGGANTQPRNNVQPNFQRDFYSSESPVQQTGFKGGSNDQSLGSLSSSGSKDQW 253

  Fly   229 KQPQAVADAVLSAVGG----------------------------------NVGTAVG--GG---- 253
            |.|..:....:.||.|                                  .:|..:|  ||
Zfish   254 KGPMNLVKMDIGAVSGGWVPPGPGFVGPRAELYNPEEPTADPKFNSTCGPGIGPPIGQQGGFQSQ 318

  Fly   254 -TISSLLGPEPLPIMPHHLPLASVRGCSSASSGCSSASSDCSMPSPTSLHLSSPKKVRIDEQYIY 317
             .::.:.....|.:.||..                   :|....:|:.|    |.:..|.|:.:|
Zfish   319 PQVAQVEEERTLSLQPHQF-------------------NDYHGTTPSHL----PHQCTICEKKVY 360

  Fly   318 KL----NYLRGS---------DELLSQAAVMAPASDNN----------------NQDLATKKAKL 353
            .|    .:::|.         :|..:..||..|.|...                :||.:|.....
Zfish   361 NLKDWDQHVKGKLHLQNCSLYNESPTLTAVHFPVSSEGCLNMALSNTMAYTSAASQDNSTGSTSY 425

  Fly   354 EPGTV-----LAGG--------------IAKASKVIHLRNIPNES-GEADVIALGIPFGRVTNVL 398
            .|.|.     |:|.              .|...:|:|:.|:|..| .|.|||.||:|||:|||.:
Zfish   426 LPATAMKSFPLSGAGFPVHQSGAKFVQRKACPGRVVHICNLPEGSCTENDVINLGLPFGKVTNYI 490

  Fly   399 VLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFS-NHRELK---------------T 447
            :::..:|||:|||...:|.:||..|.:.|..:.|:.:.::.| .::||:               .
Zfish   491 LMRSTHQAFLEMAYVEAAQAMVQYYQLQPATINGQKLLIRMSKRYKELQLKKPGKDVDSIIQDIN 555

  Fly   448 DQGHNNSTAHSD-YSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMG 495
            .|...:....:| |..:...|.||:..|.:..:.|.:..|.|.::|..|
Zfish   556 SQRERDEMQETDRYLPERARSRSPISRSLSPRSHSPSFTSCSSAHSPPG 604

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
heph	NP_001247399.1	hnRNP-L_PTB	366..898	CDD:273733	44/148 (30%)
rbm20	XP_073793599.1	None