Protein Alignment heph and matr3

DIOPT Version :9

• Sequence 1: NP_001247399.1
• Gene: heph / 48571
• FlyBaseID: FBgn0011224
• Length: 898
• Species: Drosophila melanogaster
• Sequence 2: NP_001006792.2
• Gene: matr3 / 448495
• XenbaseID: XB-GENE-983586
• Length: 892
• Species: Xenopus tropicalis
• Alignment Length: 571
• Identity: 110/571 - (19%)
• Similarity: 179/571 - (31%)
• Gaps: 209/571 - (36%)

  Fly   291 SDCSMP----SPTSLHLSSPKKVRIDEQYIYKL---------NYLRGSDELLSQAAVMAPA---- 338
            |.|.||    ...:.|:|.|.. |...|.:.::         :.:||...:|.|:...||.
 Frog   276 SICDMPVHSKQDWTQHISGPTH-RRRSQLLLEIYPDWHPEAGHGVRGDPYVLHQSTNPAPGILGP 339

  Fly   339 -----SDNNNQD--LATKKAKLEPGTVLAG------GIAKASKVIHL------RNIPNESGEADV 384
                 .....||  ..:.:..|:.|..:.|      |....|:|:|:      :|:.::     :
 Frog   340 PPPALHMGGGQDGGRRSHRGHLDLGEDMPGARSIQKGRQDNSRVVHVMDFQRGKNLRHQ-----L 399

  Fly   385 IALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRE----- 444
            :.|..|||.::|.|:|...|:|||||:....|.::|..|....|.:.|:.|.:..|...:
 Frog   400 LQLAEPFGEISNHLILNKINEAFIEMSTSDEALAVVDYYRAKTPLVFGKPVRMYLSQKYKRIKKP 464

  Fly   445 ---------LKTDQG----HNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGI 496
                     :|.|.|    |.::..||.||
 Frog   465 EVRPELKPVVKPDVGGRVVHLSNLPHSGYS----------------------------------- 494

  Fly   497 LQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALI 561
               .|||                                .::.:.||||...:...|.|  ||.|
 Frog   495 ---DSAV--------------------------------IKLAEAYGKVKTYILMRKKN--QAFI 522

  Fly   562 QYPDANSAQ----------------HAKSLLDGQNIYNGCCTLRIDNSKLTAL------------ 598
            :..:....|                |.|..|.|:  |.. ..|||.|..:..|
 Frog   523 EMENKEDVQTMIDMCEKNPLWFQGKHLKVDLSGK--YKR-LVLRIPNKAVDQLQKEKERSRKRTH 584

  Fly   599 ------------------NVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQR 645
                              :||..:..|..|......||:...:............:|:.|.....
 Frog   585 SPEQKEGSADKKLAKKEGSVKAESSLSSAFVKDKSSPGKDSEEFSKNPEEETEQQELVTIMDESD 649

  Fly   646 PSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAF----SLANSGALQTTAPAMRGYSNVL 706
            ..:..:|..|.|.|...:..:|..:...||:. ||:...    ::.|..|   :.|:....:...
 Frog   650 YLVDEDGEEAAGTLLETSSSVGDDVEQPYNSD-PNMIEMEVEGNMINDPA---SVPSSTETAQEK 710

  Fly   707 LVSNLN------EEMVTPDALFTLFGVYGD-----VQRVK--ILYNKKDSA 744
            |..:|:      |:.||.|.:       ||     .|::|  .:.|..|||
 Frog   711 LKRSLHDFPGNMEDFVTLDEV-------GDEEDFETQKIKSGFVENVLDSA 754

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
heph	NP_001247399.1	hnRNP-L_PTB	366..898	CDD:273733	89/466 (19%)
		RRM1_PTBP1_like	368..448	CDD:241132	24/99 (24%)
		RRM2_PTBP1_like	516..611	CDD:241137	23/140 (16%)
		RRM3_PTBP1_like	705..778	CDD:240869	14/53 (26%)
		RRM4_PTBP1_like	822..897	CDD:240871
matr3	NP_001006792.2	ZnF_U1	271..300	CDD:197732	8/24 (33%)
		RRM1_MATR3	382..457	CDD:241158	23/79 (29%)
		RRM2_MATR3	481..560	CDD:241159	23/153 (15%)
		CDC27	<564..>659	CDD:370537	12/94 (13%)
		ZnF_U1	845..880	CDD:197732

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910